Warning


This website contains a diagram that is only viewable on a widescreen. Please stretch the window or turn your phone. You can also click proceed and skip the diagram with translation stages (not recommended)

Proceed

Eukaryotic Protein Synthesis Inhibiting Compounds


A quick guide to small molecule inhibitors of eukaryotic protein synthesis

EuPSIC is a manually curated and continuously updated database of small molecules that have been shown in the literature to specifically inhibit eukaryotic translation in vivo or in vitro. The compounds are divided into three groups depending on their targets and are further classified according to structural and mechanistic features. Users are encouraged to search through the tables or download information in their preferred format.

Number of compounds in a database: 485

Table 1. Inhibitors of eukaryotic ribosome

SC Name Pubchem CIDs Class, group of chemical compounds MW Domain specifi-
city (BAE)
Ribosomal subunit Binding site Stage affected Mechanism of action Effect on polysomes Comments References Clinical trials Cost and Vendors PDB structures
5 253602
pyrrolidine, anisomycin group
265 AE 60S PTC (A) E S
causes ribotoxic stress; shows the amino acid specificity
NA from 44$
{3CC4 - archaea}, {4U3M - yeasts}
6 11790817
pyrrolidine, anisomycin group
223 E 60S PTC (A) E? S?
less effective than anisomycin, but does not cause ribotoxic stress
10318810 NA from 321$ NA
124 3081195
pyrrolidine, anisomycin group
318 E 60S PTC (A)? E? NA NA NA NA NA
99 neosolaniol 13818797
trichothecene A
‎382 E 60S? PTC (A)? E? NA NA 3824405 NA from 222$
{4U6F - yeasts}
102 HT-2 toxin 10093830
trichothecene A
‎424 E 60S PTC (A)? E? NA 3824405 NA from 303$ NA
93 107974
trichothecene А
264 BAE 60S? PTC (A)? E? S/D 856003 NA NA
{4U53 - yeasts}
100 acetyl T-2 546103
trichothecene A
509 E 60S? PTC (A)? E? NA NA 3824405 NA NA
{4U6F - yeasts}
96 14218252
trichothecene A
350 E 60S? PTC (A)? E? NA NA DOI
DOI
NA NA NA
98 91518
trichothecene A
366 BAE 60S PTC (A)
E (early stages)
D
irreversible inhibitors slightly inhibits rna synthesis
NA NA NA
95 trichodermin 20806
trichothecene A
292 E 60S PTC E PTC inhibitor S/D NA NA NA
94 trichodermol 12315016
trichothecene A
250 E 60S PTC E PTC inhibitor S NA NA NA
101 T-2 toxin 5284461
trichothecene A
467 E 60S PTC (A)
E (early stages)
D NA from 74$
{4U6F - yeasts}
103 T-2 triol 13797589
trichothecene A
382 E 60S? PTC (A)? E? NA
strong inducer of apoptosis; can activate the stress-activated kinases c-Jun N-terminal kinase 1 (JNK1) and/or p38MAPK (SAPK2)
3824405 NA from 306$
{4U6F - yeasts}
97 calonectrin 11473563
trichothecene A
‎350 NA 60S? PTC (A)? E PTC inhibitor S/D NA NA NA NA
104 scirpentriol 73495
trichothecene A
282 BAE 60S PTC (A) E PTC inhibitor S NA 3824405 NA NA NA
87 10382483
trichothecene B
338 E 60S? PTC (A)? E? NA NA 22859312 NA NA NA
88 40024
trichothecene B
296 E 60S PTC (A) E PTC inhibitor D NA NA from 63$
{4U53 - yeasts}
89 nivalenol 5284433
trichothecene B
312 E 60S? PTC (A)? E? D
causes ribotoxic stress
4521056 NA from 170$
{4U53 - yeasts}
92 trichothecin 12444502
trichothecene B
332 E 60S PTC (A)? E PTC inhibitor S/D NA NA NA NA
90 304599
trichothecene B
354 E 60S PTC E S/d
does not penetrate into the yeast cells
NA from 57$
{4U53 - yeasts}
91 crotocin 6437832
trichothecene С
332 E 60S PTC (A) E, T? S
reversible inhibitor
999905 NA NA NA
53 roridin A 9915017
trichothecene D
‎533 E 60S? PTC (A)? E? NA NA 3376149 NA NA
{4U50 - yeasts}
52 satratoxin G 23305158
trichothecene D
545 E
60S (28S)
40S
PTC (A) E? D
reversible binding to a ribosome
19306889 NA NA
{4U50 - yeasts}
NA NA
trichothecene D derivative
NA E NA PTC (A)? E? NA
noval molecule, poorly studied
22806769 NA ? NA
54 6326658
trichothecene D, muconomycin
NA E 60S PTC (A)
E (early stages)
PTC inhibitor S/d
irreversible inhibitor
NA NA
{4U50 - yeasts}
55 23305159
trichothecene D, muconomycin
485 E 60S? PTC (A)? E? PTC inhibitor S/d NA NA NA NA
50 11049880
trichothecene D, muconomycin
NA E 60S? PTC (A)? E? NA
noval molecule, poorly studied
22806769 NA NA NA
175 443670
tetraheterocyclic alkaloid
287 E 60S PTC (A) E PTC inhibitor (S) NA NA NA NA
170 443678
tetraheterocyclic alkaloid
317 AE 60S PTC (A) E (S) NA NA NA
{5ON6 - yeasts}
172 jonquailine 271607
tetraheterocyclic alkaloid
345 E? 60S? PTC (A)? E? NA 25598189 NA NA NA
227 5479394
tetraheterocyclic alkaloid
307 BAE? 60S? PTC (A)? E? PTC inhibitor S NA NA NA NA
174 crinamine 73620
tetraheterocyclic alkaloid
301 BAE 60S PTC (A) E (S) NA NA NA
228 narciclasine 72376
tetraheterocyclic alkaloid
293 BAE 60S PTC (A) E S NA NA from 121$
{4U51 - yeasts}
171 pretazettine 73360
tetraheterocyclic alkaloid
331 E 60S PTC (A) E S NA NA NA NA
229 101204
tetraheterocyclic alkaloid
309 BAE? 60S? PTC (A)? E? PTC inhibitor S? NA NA NA NA
NA NA
tetraheterocyclic alkaloid
NA BAE? 60S? PTC (A)? E? PTC inhibitor S? NA NA ? NA
173 441593
tetraheterocyclic alkaloid
301 AE 60S PTC (A) E S 29429877 NA NA
{5ON6 - yeasts}
166 10429288
tetraheterocyclic alkaloid
371 BAE 60S PTC (A) E PTC inhibitor NA NA NA NA NA
169 11876135
tetraheterocyclic alkaloid
289 BAE 60S PTC (A) E PTC inhibitor NA NA NA from 88$ NA
168 lycorine 72378
tetraheterocyclic alkaloid
287 BAE 60S PTC (A) E PTC inhibitor NA
small effect on yeasts?
NA from 23$ NA
167 443689
tetraheterocyclic alkaloid
289 BAE 60S PTC (A) E PTC inhibitor NA NA NA from 463$
{4U4U - yeasts}
4 agelastatin A 177936 341 E 60S PTC (A) E PTC inhibitor NA NA 28457705 NA NA
{5MEI - yeasts}
178
homoharringtonine / omacetaxine mepesuccinate
285033 546 AE 60S PTC (A)
E (early stages)
PTC inhibitor D
used in the treatment of acute leukemia
from 50$
{3G6E - archaea}, {4U4Q - yeasts}, {6EK0 - humans}, {6QZP - humans}
177 276389 532 AE 60S PTC (A)
E (early stages)
PTC inhibitor D
shows the amino acid specificity
NA from 57$
{3G6E - archaea}, {4U4Q - yeasts}, {6EK0 - humans}, {6QZP - humans}
176 65305 315 (E) 60S PTC (A)? (E)? (S)
showing minimal activity
8 USA from 50$ NA
125 15816477 527 E NA NA NA NA NA NA link
DOI
link
NA NA NA
39 amikacin 37768
aminoglycoside
586 BE 40S DC E, T D NA from 30$
{2F4V - bacteria}, {4P20 - bacteria}, {6YPU - bacteria}
40
guanidino-tobramycin
482108
aminoglycoside
678 BE? 40S
[30S]
18S (А)?
[16S]?
E?, T? D? NA NA NA NA NA
231
nagilactone C
72505 diterpenoid 362 E 60S PTC (A) E D
another activity is a stop-codon-independent ribosome dissociation
NA from 463$
{4U52 - yeasts}
232
nagilactone E
72504 diterpenoid 348 E 60S? PTC (A)? E? NA
molecular docking discovered a RIOK2 protein (atypical kinases that are related to the ribosome maturation process) as a potential targets on nagilactone E
32047261 NA NA NA
72
hydrysedisobrucein-B
NA quassinoid NA NA NA NA NA NA NA
SMILES: O=C1OC([C@]2(CO3)C4C(O)[C@@H](O)[C@]3(C(OC)=O)C2[C@H]1C)CC([C@]4(C)C5O)C(C)=CC5=O
23484873 NA NA NA
62
11-acetylamarolide
460540 quassinoid 407 NA NA NA NA NA NA NA 15737686 NA NA NA
76
15-hydroxyklaineanone
21677660 quassinoid 545 NA NA NA NA NA NA NA 15737686 NA NA NA
80
2-hydroxysimalikalactone D
NA quassinoid NA NA NA NA NA NA NA
SMILES: CCC(C(O[C@@H]1C2[C@@]3(C)[C@H](O)[C@H](O)C4C2(C(OC1=O)CC5[C@]4(C)[C@H](O)[C@H](O)C=C5C)CO3)=O)C
15737686 NA NA NA
137
2-hydroxysimalikalactone D acetate
44559536 quassinoid NA NA NA NA NA NA NA NA 15737686 NA NA NA
71 ailantinol A 460536 quassinoid 406 NA NA NA NA NA NA NA 15737686 NA NA NA
78 ailanthinone 441784 quassinoid 479 E 60S? PTC (A)? NA PTC inhibitor NA
the mechanism of action is not fully understood, it is assumed that it violates the normal functions of the ribosome; antimalarial was activity detected
2198027 NA NA NA
85 ailanthone 72965 quassinoid 376 NA NA NA NA NA NA NA 15737686 NA from 48$ NA
51 baccharinol 6436238 quassinoid 563 E 60S? PTC (A)? E? NA
the mechanism of action of baccharinol has not been reported, but it is a trichothecin epoxide that likely inhibits elongation
14769948 NA NA NA
142 brusatol 73432 quassinoid 521 E 60S? PTC (A) E? NA NA from 43$
{3G71 - archaea}
143 bruceantin 5281304 quassinoid ‎549 AE 60S PTC (A) E NA NA from 121$
{3G71 - archaea}
74 brucein D 432922 quassinoid 410 NA NA NA NA NA NA NA 15737686 NA NA NA
81 brucein E 122785 quassinoid 412 NA NA NA NA NA NA NA 15737686 NA NA NA
162 bruceanol A 127805 quassinoid 543 NA NA NA NA NA NA NA 15737686 NA NA NA
129 bruceanol B 14060344 quassinoid 537 NA NA NA NA NA NA NA 15737686 NA NA NA
131 bruceanol D 70697724 quassinoid 549 NA NA NA NA NA NA NA 15737686 NA NA
{3G71 - archaea}
132 bruceanol E 9985020 quassinoid 551 NA NA NA NA NA NA NA 15737686 NA NA NA
133 bruceanol H 10745249 quassinoid 551 NA NA NA NA NA NA NA 15737686 NA NA NA
157 6436226 quassinoid 711 NA NA NA NA NA NA NA 15737686 NA NA NA
146 6474271 quassinoid 711 NA NA NA NA NA NA NA 15737686 NA NA NA
150 6436229 quassinoid 769 NA NA NA NA NA NA NA 15737686 NA NA NA
154 441789 quassinoid 683 NA NA NA NA NA NA NA 15737686 NA NA NA
145
bruceoside B
3000796 quassinoid 683 NA NA NA NA NA NA NA 15737686 NA NA NA
156
bruceoside D
460525 quassinoid 669 NA NA NA NA NA NA NA 15737686 NA NA NA
159
bruceoside E
460524 quassinoid 671 NA NA NA NA NA NA NA 15737686 NA NA NA
151 bruceoside F 6451123 quassinoid 755 NA NA NA NA NA NA NA 15737686 NA NA NA
155
bruceoside G
NA quassinoid NA NA NA NA NA NA NA
SMILES: CC1C2CC3C45COC(C(O)C(O)C5C2(C)C=C(OC6C(O)C(O)C(O)C(CO)O6)C1=O)(C(O)=O)C4C(OC(/C=C(C(C)C)\C)=O)C(O3)=O
15737686 NA NA NA
82 glaucarubol 225484 quassinoid 396 NA NA NA NA NA NA NA 15737686 NA NA NA
75 441797 quassinoid 394 NA NA NA NA NA NA NA 6155912 NA NA NA
77 158475 quassinoid 437 E? 60S PTC (A) NA PTC inhibitor NA NA NA NA NA
134 54602813 quassinoid 477 E 60S? PTC (A)?
E (early stages)
PTC inhibitor NA NA 6927363 NA NA NA
135 54602813 quassinoid 603 E 60S? PTC (A)?
E (early stages)
PTC inhibitor NA NA 6927363 NA NA NA
161 315123 quassinoid 541 NA NA NA NA NA NA NA NA NA NA
NA
dehydrobrucentin
NA quassinoid NA NA NA NA NA NA NA
SMILES:
CC1=C(C[C@@H]2[C@]34[C@@H]5[C@@H](O)[C@H](O)[C@](OC4)(C(OC)=O)[C@@H]3[C@@H](OC(/C=C(C(C)C)\C)=O)C(O2)=O)[C@]5(C)C=C(O)C1O
15737686 NA ? NA
130 isobrucein B 99530 quassinoid 481 NA NA NA NA NA NA NA 15737686 NA NA NA
69 quassin 65571 quassinoid 389 E? 60S? PTC (A)? E? NA NA NA 15737686 NA from 463$ NA
67 neoquassin 72964 quassinoid 391 BAE? 40S? DC? (R?) NA NA 15737686 NA NA NA
19
nigakihemiacetal A
441803 quassinoid 411 NA NA NA NA NA NA NA 15737686 NA NA NA
18
nigakihemiacetal D
182704 quassinoid 453 NA NA NA NA NA NA NA 15737686 NA NA NA
66
nigakihemiacetal E
102267540 quassinoid 395 NA NA NA NA NA NA NA 15737686 NA NA NA
24
nigakihemiacetal F
101665330 quassinoid 395 NA NA NA NA NA NA NA 15737686 NA NA NA
21
nigakihemiacetal L
182233 quassinoid NA NA NA NA NA NA NA NA 15737686 NA NA NA
61 picrasin A 185611 quassinoid 475 NA NA NA NA NA NA NA 15737686 NA NA NA
68 picrasin B 12313355 quassinoid 376 NA NA NA NA NA NA NA 15737686 NA from 463$ NA
22 picrasin D 46173860 quassinoid 391 NA NA NA NA NA NA NA 15737686 NA NA NA
23 picrasin E 182116 quassinoid 407 NA NA NA NA NA NA NA 15737686 NA NA NA
NA picrasinol C NA quassinoid NA NA NA NA NA NA NA
SMILES:
O=C1C(OC)=C(C)[C@@]2(O)[C@]3(C)[C@@](OC(C2)=O)([H])C[C@]([C@@]4(C)[C@@]31[H])([H])[C@@H](C)C=C(OC)C4=O
15737686 NA ? NA
20 picrasinol D 101921953 quassinoid 409 NA NA NA NA NA NA NA 15737686 NA NA NA
NA
semalikalactone D 11,12 diacetate
NA quassinoid NA NA NA NA NA NA NA
SMILES:
O[C@H]1[C@@]2(C)[C@@](C[C@](O3)([H])[C@]4(CO5)[C@@]2([H])[C@@H](OC(C)=O)[C@@H](OC(C)=O)[C@]5(C)[C@]4([H])[C@@H](OC(C(C)CC)=O)C3=O)([H])C(C)=CC1=O
15737686 NA ? NA
138 sergeolide 134025 quassinoid 505 NA NA NA NA NA NA
anti-malarial drug
15737686 NA NA NA
79
semalikalactone D
15161842 quassinoid NA NA NA NA NA NA NA NA 15737686 NA NA NA
84
sinjulactone A
460537 quassinoid NA NA NA NA NA NA NA NA 15737686 NA NA NA
70
sinjulactone B
21148461 quassinoid NA NA NA NA NA NA NA NA 15737686 NA NA NA
86
sinjulactone C
11970132 quassinoid NA NA NA NA NA NA NA NA 15737686 NA NA NA
136 undulatone 5281311 quassinoid 535 NA NA NA NA NA NA NA NA NA NA
83 chaparrin 441791 quassinoid 380 NA NA NA NA NA NA NA 15737686 NA NA NA
73 73154 quassinoid 378 NA NA NA NA NA NA NA 6155912 NA NA NA
NA NA quassinoid NA E NA NA E NA NA NA 6875823 NA ? NA
NA NA quassinoid NA E NA NA E NA NA NA NA ? NA
158 72956 quassinoid 685 NA NA NA NA NA NA NA 15737686 NA NA NA
147
yadanzioside B
72952 quassinoid 701 NA NA NA NA NA NA NA 15737686 NA NA NA
153
yadanzioside C
6436227 quassinoid 727 NA NA NA NA NA NA NA 15737686 NA NA NA
NA
yadanzioside D
SID quassinoid NA NA NA NA NA NA NA NA 15737686 NA ? NA
148
yadanzioside E
460522 quassinoid 685 NA NA NA NA NA NA NA 15737686 NA NA NA
152
yadanzioside G
6436228 quassinoid 769 NA NA NA NA NA NA NA 15737686 NA NA NA
144
yadanzioside L
6436225 quassinoid 727 NA NA NA NA NA NA NA 15737686 NA NA NA
160
yadanzioside M
72961 quassinoid 705 NA NA NA NA NA NA NA 15737686 NA NA NA
149
yadanzioside N
6451089 quassinoid 711 NA NA NA NA NA NA NA 15737686 NA NA NA
139 BJF 8 NA quassinoid NA NA NA NA NA NA NA
SMILES: C/C(C(F)(F)F)=C\C(O[C@H]1C(O[C@]([C@]2(CO3)[C@]4([H])[C@@H](O)[C@@H](O)[C@]3(C(OC)=O)[C@]12[H])([H])C[C@@]([C@]4(C)C5)([H])C(C)=C(OC(/C=C(C(F)(F)F)/C)=O)C5=O)=O)=O
15737686 NA NA NA
141 BJF 11 NA quassinoid NA NA NA NA NA NA NA
SMILES: C/C(C(F)(F)F)=C/C(O[C@H]1C(O[C@]([C@]2(CO3)[C@]4([H])[C@@H](O)[C@@H](O)[C@]3(C(OC)=O)[C@]12[H])([H])C[C@@]([C@]4(C)C5)([H])C(C)=C(O)C5=O)=O)=O
15737686 NA NA NA
NA
D13(18)-dehydroglaucarubinone
NA quassinoid NA NA NA NA NA NA NA NA 15737686 NA ? NA
NA IBI 5 NA quassinoid NA NA NA NA NA NA NA NA 15737686 NA ? NA
140 IBI 12 NA quassinoid NA NA NA NA NA NA NA
SMILES: C/C(C(F)(F)F)=C\C(O[C@H]1C(O[C@]([C@]2(CO3)[C@]4([H])[C@@H](O)[C@@H](O)[C@]3(C(OC)=O)[C@]12[H])([H])C[C@@]([C@]4(C)C5)([H])C(C)=C(O)C5=O)=O)=O
15737686 NA NA NA
127 SUN 0237 5458870 quassinoid 573 E NA NA NA NA NA NA 14769948 NA NA NA
128 SUN 2071 5458871 quassinoid 545 E? NA NA NA NA NA NA NA NA NA
217 6438494 345 E 60S PTC (A, P)? NA NA NA 2014963 NA NA NA
121 9576961 NA E 60S? PTC (A, P)? NA NA
the cytostatic activity of sparsomycin seems to be related to its lipophilicity: octylsparsomycin was shown to be three times as effective as sparsomycin
2014963 NA NA NA
219 sparsomycin 9543443 ‎361 BAE 60S PTC (A, P) Е PTC inhibitor S NA from 235$
{1M90 - archaea}, {1NJM - bacteria}, {1NJN - bacteria}, {1VQ8 - archaea}, {1VQ9 - archaea}, {5DGE - yeasts}, {5DGF - yeasts}, {5DGV - yeasts}, {5TGM - yeasts}
189 9578328 377 BAE 60S? PTC (A,P)? NA NA
believed to be a more effective anti-tumor agent than sparsomycin itself
reversible inhibitor;
binding experiments indicated that sparsomycin and its derivatives are fully competitive in their interaction with the ribosome
2014963 NA NA NA
218 6436444 360 E 60S? PTC (A, P)? NA NA NA 2014963 NA NA
{1M90 - archaea}, {1NJM - bacteria}, {1NJN - bacteria}, {1VQ8 - archaea}, {1VQ9 - archaea}, {5DGE - yeasts}, {5DGF - yeasts}, {5DGV - yeasts}, {5TGM - yeasts}
187 MDL 19152 6105995 NA E 60S PTC (A, P)? NA NA NA 2014963 NA NA NA
188 MDL 20828 6438817 393 E 60S PTC (A, P)? NA NA NA 2014963 NA NA NA
119 9576884 404 E 60S PTC (A, P)? NA NA NA 2014963 NA NA NA
29 66365 584 BAE 60S PTC (P) E PTC inhibitor (S) NA 371683 NA NA NA
164 amicetin 28675
nucleoside, blasticidin group
619 BAE 60S PTC E PTC inhibitor S NA 8157007 NA NA
{6CZR - bacteria}
59 arginomycin 129552
nucleoside, blasticidin group
437 BAE 60S? PTC? E? NA NA 3610832 NA NA
{1KC8 - archaea}, {4U56 - yeasts}, {4V9Q - yeasts}, {6B4V - yeasts}, {6BOH - bacteria}
165 bamicetin 170723
nucleoside, blasticidin group
605 BAE 60S PTC E PTC inhibitor NA NA 25522318 NA NA NA
58 blasticidin S 170012
nucleoside, blasticidin group
422 BAE 60S PTC (P) E PTC inhibitor NA
in bacteria, they inhibit elongation and termination, in eukaryotes-elongation; shows amino acid specificity
NA NA
{1KC8 - archaea}, {4U56 - yeasts}, {4V9Q - yeasts}, {6B4V - yeasts}, {6BOH - bacteria}
60 gougerotin 11226719
nucleoside, blasticidin group
443 BAE 60S PTC E PTC inhibitor D NA NA NA NA
57 mildiomycin 12850205
nucleoside, blasticidin group
515 BE 60S PTC E PTC inhibitor NA
antibiotic does not easily pass through the cell membrane, as occurs with other nucleoside and aminoglycoside antibiotics
2409064 NA NA NA
3 nucleocidin 72299
nucleoside, blasticidin group
364 BE 60S PTC NA PTC inhibitor NA
high active against trypanosomes;
ithere is an in vivo activity;
the mechanism is not fully understood;
NA NA NA NA
163 plicacetine 206175
nucleoside, blasticidin group
518 BAE 60S? PTC? E? NA NA NA NA NA
{6CZR - bacteria}
13 puromycin 439530
aminoacyl-nucleoside
472 BAE 60S A site E D
puromycin is a structural analog of aminoacyl-tRNA
NA NA
{1FFZ - archaea}, {1FG0 - archaea}, {1KQS - archaea}, {1NJM - bacteria}, {1NJO - bacteria}, {1NJP - bacteria}, {1Q7Y archaea}, {1Q81 - archaea}, {1Q82 - archaea}, {1VQL - archaea}, {1VQM - archaea}, {1VQN - archaea}, {1VQO - archaea}, {1VQP - archaea}, {1VVJ - bacteria}, {1VY6 - bacteria}, {1VY7 - bacteria}, 2DPT, {3CD6 - archaea}, 3Q3D, {4L47 - bacteria}, {4L71 - bacteria}, {4LEL - bacteria}, {4LFZ - bacteria}, {4LNT - bacteria}, {4LSK - bacteria}, {4LT8 - bacteria}, {4P70 - bacteria}, {4TUA - bacteria}, {4TUB - bacteria}, {4TUC - bacteria}, {4TUD - bacteria}, {4TUE - bacteria}, {4YZV - bacteria}, {4ZSN - bacteria}, {5LYB - yeasts}, {6N9E - bacteria}, {6NDK - bacteria}, {6OTR - bacteria}, {6OXA - bacteria}, {6OXI - bacteria}
12 A201A 137348262
aminoacyl-nucleoside
803 BAE 60S A site E PTC inhibitor NA NA 26028538 NA NA
{4Z3S - bacteria}
15 baciphelacin 171612 isocoumarin 423 BAE NA NA I?, R? NA
it does not act at the stage of attachment of the substrate to the ribosome, or during the formation of a peptide bond
DOI NA NA
{4W2F - bacteria}, {5I4L - yeasts}
16 actinobolin 54688606 isocoumarin 300 BAE 60S PTC E PTC inhibitor NA NA 7196909 NA NA NA
14 25223631 isocoumarin ‎424 BAE 40S E site E NA NA NA NA
{4W2F - bacteria}, {5I4L - yeasts}
214 oosponol 5324556 isocoumarin 220 BAE? 40S? NA E? NA NA NA 9210464 NA NA NA
17 bactobolin 54676871 isocoumarin 383 BAE? 60S PTC (P) E NA NA NA NA
{4WT8 - bacteria}
123 AHR-1911 31429
thiopseudourea
356 BAE 60S? PTC? E PTC inhibitor NA NA 4822728 NA NA NA
2 54683011 pyrroline 197 E 60S?
[50S]
PTC (A, P) NA S NA NA NA
186 3081434
cyclic peptide
823 BAE? 60S?
[50S]
PTC?
[A site]
E? [not D] NA 6337880 NA NA NA
185 42640128
cyclic peptide
711 BAE 40S, 60S
uS17, uL3, uL30, etc.
NA NA NA
the San B derivatives bound proteins from the 40S (S11) and the 60S (L3, 7, 12, 18, 23) subunits, whereas 2-tag derivative appears to primarily interact with 60S ribosomal subunits (L9, 10, 13, 17)
DOI NA NA NA
56 griseoviridin 11225326
cyclodepsipeptide
‎477 BAE 60S PTC E NA
affinity to eukaryotic ribosomes is much lower than to bacterial ribosomes; the spectrum of action is comparable to that of streptogramin A
1096949
DOI
NA NA NA
204 54675761
ergoline alkaloid
336 BAE 60S? NA E NA
competition of the toxin with the eukaryotic elongation factor EF1 and EF2,
only appears to be toxic in high concentrations
DOI NA NA NA
225 doxycycline 54671203
aromatic polyketide, tetracycline group
444 BAE 40S, 60S PET etc. E? NA NA NA 30318461 from 50$ NA
224 minocycline 54675783
aromatic polyketide, tetracycline group
457 BAE
40S? 60S?
[30S]
[16S] E? NA NA
it shows a wide range of activity, including anti-inflammatory, neuroprotective and neuroprotective effects
from 30$ NA
222 129395
aromatic polyketide, tetracenomycin group
486 BAE 60S PET E?
prevents the progress of the synthesized peptide in the ribosomal tunnel?
NA NA 32601485 NA NA
{6Y69 - bacteria}, {6Y6X - human}
221 NA
aromatic polyketide, tetracycline group
NA BAE 40S, 60S PET etc. E? NA NA
metalloproteins inhibitor, SMILES: NC(C1=C(O)CC(C2)[C@@](C1=O)(O)C=C(C2C3)C(C4=C3C=CC=C4O)=O)=O
NA NA NA
223 tigecycline 54686904
aromatic polyketide, tetracenomycin group
586 BAE 40S?, 60S? NA E NA NA [11163189] from 60$
{1HNW - bacteria}
226 doxorubicin 31703
aromatic polyketide,
anthracycline group
544 E? NA NA T NA NA 1277199 NA NA
220 actiphenol 245940 glutarimide 275 E 60S? E site? E? NA low activity NA from 267$ NA
111 73396 glutarimide 339 E 60S E site? E S NA 5220953 NA NA NA
NA NA glutarimide NA NA 60S? E site? E? NA
10 times more active than cycloheximide
30802354 NA ? NA
114 11669726 glutarimide 458 E 60S E (C3993) E D NA NA from 1140$
{4U4R - yeasts}
110 91467 glutarimide 297 E 60S E site? E? S NA NA
{4U3U - yeasts}, {5GAK - yeasts}, {5LKS - human}, {6HD7 - yeasts}, {6TNU - yeasts}, {6Y0G - human}, {6Y2L - human}
107 145721258 glutarimide NA BAE 60S? E site? E? NA NA 31584271 NA NA NA
117 125175 glutarimide 334 NA NA E site? E? NA
10 times more active than cycloheximide, binds irreversibly
30802354 NA from 38$ NA
109 6197 glutarimide 281 E 60S E site E S NA NA from 37$ NA
113 15940571 glutarimide 490 E 60S? E site? E? NA NA 20118940 NA NA NA
108 naramycin B 120760 glutarimide 281 E 60S? E site? NA NA
stereoisomer of cycloheximid
DOI NA NA
{5GAK - yeasts}, {6Y2L - humans}
112 5351572 glutarimide 293 E 60S E site? E NA NA NA from 321$ NA
115 ECA-LTM NA glutarimide NA E 60S? E site? E? NA 26577990 NA NA NA
NA NA
labdane diterpenoid
400 E 60S? E site? E? NA NA 29064494 NA ? NA
234 10549927
labdane diterpenoid
418 E 60S E site E S? NA 16540697 NA NA
{5TBW - yeasts}, {6HHQ - yeasts}
233 NA
labdane diterpenoid
NA E 60S
E site (G2794)
E S
SMILES: O=C(NC(C1)=O)[C@H]1[C@@H](C)C[C@H]([C@]2(C)[C@@](CC3[H])(C)C(C)(C)[C@@H](C)[C@@H](C)C2)C3=C
30759226 NA NA NA
235 NA
labdane diterpenoid
NA E NA NA E S
SMILES: O=C(NC(C1)=O)[C@H]1[C@@H](O)C[C@H]([C@]2(C)[C@@](C[C@@H]3OC(C)=O)([H])C(C)(C)[C@@H](Cl)[C@@H](Cl)C2)C3=C
29064494 NA NA NA
236 21778723
labdane diterpenoid
426 E NA NA E S NA 29064494 NA NA NA
238 21778724
labdane diterpenoid
350 E NA E site? E S NA 29064494 NA NA
{5TBW - yeasts}
237 127675
labdane diterpenoid
384 E 60S E site E S? NA NA NA
{5TBW - yeasts}, {6HHQ - yeasts}
48 6436218 glycoside 805 E 60S E site E D
another activity is a stop-codon-independent ribosome dissociation; irreversible inhibitor (see covalent bond on 4U4Z structure)
NA NA 4U4Z
49 5477653 glycoside 763 E 60S? E site? NA NA NA 14970397 NA NA
{4U4Z - yeasts}
45 10345974 504 BAE 60S E (C3993) E NA NA NA NA
{3I55 - archaea}
44 6711419 518 BAE 60S E (C3993) E D NA NA NA NA
47 onnamide A 23426006 794 A?E 60S E site E NA
causes ribotoxic stress
15958059 NA NA NA
43 pederine 5381287 504 E 60 E site E S/d
causes ribotoxic stress
NA NA
{3I55 - archaea}
230 11692946 610 E 60S E site E NA NA 22827176 NA NA NA
46 101627278 544 AE 60S E site E NA NA 15958059 NA NA NA
105 71306325 373 AE eEF2? NA E NA 23303710 NA NA NA
106 100917959 373 AE eEF2? NA E NA 23303710 NA NA NA
64 16040283 595 AE 60S E site E NA NA NA
{2OTJ - archaea}
63 tedanolide 5478005 611 A?E 60S E site E NA NA NA NA
{2OTJ - archaea}
183 21022 479 E 40S? E site? E? (S) NA 560858 NA from 764$ NA
182 cephaeline 442195 467 E 40S? E site? E? (S) NA NA from 109$
{3J7A - plasmodium}, {6OKK - plasmodium}
181 emetine 10219 481 E 40S E site E S
antiprotozoal and anthelmintic agent
NA from 228$
{3J7A - plasmodium}, {6OKK - plasmodium}
211 92765 377 E 40S, 60S? E site E NA NA NA from 353$
{4U55 - yeasts}
208 tylocrebrine 246845 394 B?E 40S? E site? E NA NA NA NA
{4U55 - yeasts}
207 92114 394 B?AE 40S E site? E S NA NA NA
{4U55 - yeasts}
180 tubulosine 72341 ‎476 E 40S, 60S? E site? E NA NA NA NA NA
206 DCB-3503 402628 410 E 40S? E site? E NA NA 23251437 NA NA NA
212 57397503 378 E 40S? E site? E NA NA 23251437 NA NA NA
210 YXM-109 60200110 NA E 40S? E site? E NA NA 23251437 NA NA NA
209 YXM-110 60200111 NA E 40S? E site? E NA NA 23251437 NA NA NA
10 56652064 NA BAE 40S? E site? E (I?) NA NA [23702293] NA NA NA
11 pactamycin 5289124 559 BAE 40S E site E, (I?) (D) NA NA
{1HNX - bacteria}, {4KHP - bacteria}, {4U4Y - yeasts}, {4W2G - bacteria}, {4W2H - bacteria}
65 zaluzanin C 72646 246 E NA NA E NA NA 6383382 NA NA NA
28 123865
2-DOS aminoglycoside, 4,6-disubstituted
497 BE 40S, 60S DC, PET E, T D NA NA NA
RNA{1MWL - bacteria}, RNA{4K32 - leishmanial}, 30S{4LF9 - archaea}, {4V55 - bacteria}, 5CFT, 5IQC, 5IQG, {5NDG - yeasts}, 5OBM, 5U0T, 5U18, 5U19, 5U1I, 5XZ1, 5Z71, 5Z8A, 5ZEI, 6MN1, 6MN5, 6NP3, 6NTJ, 6O97
27 86483
2-DOS aminoglycoside, 4,6-disubstituted
478 BE 60S DC, PET E, T D NA NA
{4V53 - bacteria}
42 netilmicin 441306
2-DOS aminoglycoside, 4,6-disubstituted
476 BAE? 40S? DC? E? D? NA DOI EU 1 NA
4F8U, 4F8V, 5C4L, 5U08, 6BBZ, 6BC2, 6BC3, 6BC7, 6CAP, 6CAR, 6MB4, 6MN2, 6NP2
41 tobramycin 36294 468 BE? 40S, 60S? DC E, T D?
irreversible inhibitor
from 40$
1EI2, 1FJG, 1FYP, 1I9V, 1IBK, 1IBL, 1J7T, 1KNY, 1L8T, 1LC4, 1M4D, 1M4G, 1M4I, 1N32, 1N33, 1ND4, 1S3Z, 1V0C, 1VVJ, 1XMO, 1XMQ, 1XNQ, 1XNR, 2A04, 2B0Q, 2BUE, 2ESI, 2ESJ, 2ET4, 2ET5, 2ET8, 2F4S, 2FCX, 2FCY, 2FCZ, 2FD0, 2KXM, 2MXS, 2N0J, 2O3V, 2O3W, 2O3X, 2QIR, 2UU9, 2UUA, 2UUB, 2UUC, 2UXB, 2UXC, 2UXD, 2VQE, 2VQF, 2VQY, 3BNQ, 3BNR, 3C3Z, 3C44, 3C5D, 3C7R, 3DVV, 3KP5, 3Q5R, 3SG8, 3SG9, 3T1H, 3T1Y, 3U6T, 3VET, 4DFB, 4DFU, 4DR2, 4DR4, 4EBK, 4EM0, 4EVY, 4FEU, 4FEV, 4FEW, 4FEX, 4GKH, 4GKI, 4GKJ, 4GKK, 4JD6, 4JYA, 4KHP, 4L47, 4L71, 4LEL, 4LF6, 4LF7, 4LF8, 4LFB, 4LFC, 4LNT, 4LSK, 4LT8, 4OKN, 4P6F, 4P70, 4QB9, 4QC6, 4TUA, 4TUB, 4TUD, 4TUE, 4V51, 4V52, 4V57, 4V5C, 4V5D, 4V5G, 4V5L, 4V5Y, 4V8C, 4V8F, 4V8J, 4V97, 4V9C, 4W29, 4WOI, 4WQL, 4WRA, 4WSD, 4WT8, 4X62, 4X64, 4X65, 4X66, 4XJE, 4ZC7, 5A9Z, 5AA0, 5BR8, 5CFS, 5DV4, 5EL6, 5EL7, 5IB7, 5IQB, 5IQD, 5IQE, 5IQR, 5NDJ, 5NDK, 5NDV, 5NDW, 5TCU, 5U0N, 5U0T, 5U1E, 5U1I, 5WNT, 5WNU, 5WNV, 5Z8K, 5ZEJ, 6AZ1, 6AZ3, 6BFH, 6C5U, 6CAO, 6CAV, 6CEY, 6CTZ, 6DTI, 6E0D, 6FD2, 6JW7, 6JW8, 6MB5, 6MB7, 6MB9, 6MKN, 6MPF, 6MPI, 6NMK, 6NML, 6NMM, 6NMN, 6NP4, 6NP5, 6NTI, 6O5U, 6OF6, 6OJ2, 6OPE, 6ORD, 6P04, 6P06, 6P08, 6S0S, 6S0V, 6S0W, 6UN8, 7K00
38 lividomycin 72394 762 BAE? 40S? DC? E NA NA NA NA NA
1EI2, 1FJG, 1FYP, 1I9V, 1IBK, 1IBL, 1J7T, 1KNY, 1L8T, 1LC4, 1M4D, 1M4G, 1M4I, 1N32, 1N33, 1ND4, 1S3Z, 1V0C, 1VVJ, 1XMO, 1XMQ, 1XNQ, 1XNR, 2A04, 2B0Q, 2BEE, 2BUE, 2ESI, 2ESJ, 2ET4, 2ET5, 2ET8, 2F4S, 2FCX, 2FCY, 2FCZ, 2FD0, 2KXM, 2MXS, 2N0J, 2O3V, 2O3W, 2O3X, 2QIR, 2UU9, 2UUA, 2UUB, 2UUC, 2UXB, 2UXC, 2UXD, 2VQE, 2VQF, 2VQY, 3BNQ, 3BNR, 3C3Z, 3C44, 3C5D, 3C7R, 3DVV, 3KP5, 3Q5R, 3SG8, 3SG9, 3T1H, 3T1Y, 3U6T, 3VET, 4DFB, 4DFU, 4DR2, 4DR4, 4EBK, 4EM0, 4EVY, 4FEU, 4FEV, 4FEW, 4FEX, 4GKH, 4GKI, 4GKJ, 4GKK, 4JD6, 4JYA, 4KHP, 4L47, 4L71, 4LEL, 4LF6, 4LF7, 4LF8, 4LFB, 4LFC, 4LNT, 4LSK, 4LT8, 4OKN, 4P6F, 4P70, 4QB9, 4QC6, 4TUA, 4TUB, 4TUD, 4TUE, 4V51, 4V52, 4V57, 4V5C, 4V5D, 4V5G, 4V5L, 4V5Y, 4V8C, 4V8F, 4V8J, 4V97, 4V9C, 4W29, 4WOI, 4WQL, 4WRA, 4WSD, 4WT8, 4X62, 4X64, 4X65, 4X66, 4XJE, 4ZC7, 5A9Z, 5AA0, 5BR8, 5CFS, 5DV4, 5EL6, 5EL7, 5IB7, 5IQB, 5IQD, 5IQE, 5IQR, 5NDJ, 5NDK, 5NDV, 5NDW, 5TCU, 5U0N, 5U1E, 5WNT, 5WNU, 5WNV, 5Z8K, 5ZEJ, 6AZ1, 6AZ3, 6BFH, 6C5U, 6CAO, 6CAV, 6CEY, 6CTZ, 6DTI, 6E0D, 6FD2, 6JW7, 6JW8, 6MB5, 6MB7, 6MB9, 6MKN, 6MPF, 6MPI, 6NMK, 6NML, 6NMM, 6NMN, 6NP4, 6NP5, 6NTI, 6O5U, 6O97, 6OF6, 6OJ2, 6OPE, 6ORD, 6P04, 6P06, 6P08, 6S0S, 6S0V, 6S0W, 6UN8, 7K00
36 neomycin 8378 615 BAE? 40S? DC? (R?) NA NA NA
1EI2, 1FJG, 1FYP, 1I9V, 1IBK, 1IBL, 1J7T, 1KNY, 1L8T, 1LC4, 1M4D, 1M4G, 1M4I, 1N32, 1N33, 1ND4, 1S3Z, 1V0C, 1VVJ, 1XMO, 1XMQ, 1XNQ, 1XNR, 2A04, 2B0Q, 2BEE, 2BUE, 2ESI, 2ESJ, 2ET4, 2ET5, 2ET8, 2F4S, 2FCX, 2FCY, 2FCZ, 2FD0, 2KXM, 2MXS, 2N0J, 2O3V, 2O3W, 2O3X, 2QIR, 2UU9, 2UUA, 2UUB, 2UUC, 2UXB, 2UXC, 2UXD, 2VQE, 2VQF, 2VQY, 3BNQ, 3BNR, 3C3Z, 3C44, 3C5D, 3C7R, 3DVV, 3KP5, 3Q5R, 3SG8, 3SG9, 3T1H, 3T1Y, 3U6T, 3VET, 4DFB, 4DFU, 4DR2, 4DR4, 4EBK, 4EM0, 4EVY, 4FEU, 4FEV, 4FEW, 4FEX, 4GKH, 4GKI, 4GKJ, 4GKK, 4JD6, 4JYA, 4KHP, 4L47, 4L71, 4LEL, 4LF6, 4LF7, 4LF8, 4LFB, 4LFC, 4LNT, 4LSK, 4LT8, 4OKN, 4P6F, 4P70, 4QB9, 4QC6, 4TUA, 4TUB, 4TUD, 4TUE, 4V51, 4V52, 4V57, 4V5C, 4V5D, 4V5G, 4V5L, 4V5Y, 4V8C, 4V8F, 4V8J, 4V97, 4V9C, 4W29, 4WOI, 4WQL, 4WRA, 4WSD, 4WT8, 4X62, 4X64, 4X65, 4X66, 4XJE, 4ZC7, 5A9Z, 5AA0, 5BR8, 5CFS, 5DV4, 5EL6, 5EL7, 5IB7, 5IQB, 5IQD, 5IQE, 5IQR, 5NDJ, 5NDK, 5NDV, 5NDW, 5TCU, 5U0N, 5U1E, 5WNT, 5WNU, 5WNV, 5Z8K, 5ZEJ, 6AZ1, 6AZ3, 6BFH, 6C5U, 6CAO, 6CAV, 6CEY, 6CTZ, 6DTI, 6E0D, 6FD2, 6JW7, 6JW8, 6MB5, 6MB7, 6MB9, 6MKN, 6MPF, 6MPI, 6NMK, 6NML, 6NMM, 6NMN, 6NP4, 6NP5, 6NTI, 6O5U, 6O97, 6OF6, 6OJ2, 6OPE, 6ORD, 6P04, 6P06, 6P08, 6S0S, 6S0V, 6S0W, 6UN8, 7K00
37
paromomycin
165580 616 BE 40S, 60S DC (R?) D USA 9, EU 1 from 213$
1EI2, 1FJG, 1FYP, 1I9V, 1IBK, 1IBL, 1J7T, 1KNY, 1L8T, 1LC4, 1M4D, 1M4G, 1M4I, 1N32, 1N33, 1ND4, 1S3Z, 1V0C, 1VVJ, 1XMO, 1XMQ, 1XNQ, 1XNR, 2A04, 2B0Q, 2BEE, 2BUE, 2ESI, 2ESJ, 2ET4, 2ET5, 2ET8, 2F4S, 2FCX, 2FCY, 2FCZ, 2FD0, 2KXM, 2MXS, 2N0J, 2O3V, 2O3W, 2O3X, 2QIR, 2UU9, 2UUA, 2UUB, 2UUC, 2UXB, 2UXC, 2UXD, 2VQE, 2VQF, 2VQY, 3BNQ, 3BNR, 3C3Z, 3C44, 3C5D, 3C7R, 3DVV, 3KP5, 3Q5R, 3SG8, 3SG9, 3T1H, 3T1Y, 3U6T, 3VET, 4DFB, 4DFU, 4DR2, 4DR4, 4EBK, 4EM0, 4EVY, 4FEU, 4FEV, 4FEW, 4FEX, 4GKH, 4GKI, 4GKJ, 4GKK, 4JD6, 4JYA, 4KHP, 4L47, 4L71, 4LEL, 4LF6, 4LF7, 4LF8, 4LFB, 4LFC, 4LNT, 4LSK, 4LT8, 4OKN, 4P6F, 4P70, 4QB9, 4QC6, 4TUA, 4TUB, 4TUD, 4TUE, 4V51, 4V52, 4V57, 4V5C, 4V5D, 4V5G, 4V5L, 4V5Y, 4V8C, 4V8F, 4V8J, 4V97, 4V9C, 4W29, 4WOI, 4WQL, 4WRA, 4WSD, 4WT8, 4X62, 4X64, 4X65, 4X66, 4XJE, 4ZC7, 5A9Z, 5AA0, 5BR8, 5CFS, 5DV4, 5EL6, 5EL7, 5IB7, 5IQB, 5IQD, 5IQE, 5IQR, 5NDJ, 5NDK, 5NDV, 5NDW, 5TCU, 5U0N, 5U1E, 5WNT, 5WNU, 5WNV, 5Z8K, 5ZEJ, 6AZ1, 6AZ3, 6BFH, 6C5U, 6CAO, 6CAV, 6CEY, 6CTZ, 6DTI, 6E0D, 6FD2, 6JW7, 6JW8, 6MB5, 6MB7, 6MB9, 6MKN, 6MPF, 6MPI, 6NMK, 6NML, 6NMM, 6NMN, 6NP4, 6NP5, 6NTI, 6O5U, 6O97, 6OF6, 6OJ2, 6OPE, 6ORD, 6P04, 6P06, 6P08, 6S0S, 6S0V, 6S0W, 6UN8, 7K00
31 NB124 71461381 581 B?E 40S DC? E, T NA NA EU 1 NA
1EI2, 1FJG, 1FYP, 1I9V, 1IBK, 1IBL, 1J7T, 1LC4, 1M4D, 1M4G, 1N32, 1N33, 1S3Z, 1V0C, 1VVJ, 1XMO, 1XMQ, 1XNQ, 1XNR, 2A04, 2B0Q, 2BUE, 2ESJ, 2ET4, 2ET5, 2FCY, 2FCZ, 2FD0, 2KXM, 2MXS, 2N0J, 2O3W, 2O3X, 2QIR, 2UU9, 2UUA, 2UUB, 2UUC, 2UXB, 2UXC, 2UXD, 2VQE, 2VQF, 2VQY, 3BNQ, 3BNR, 3C3Z, 3C44, 3C5D, 3C7R, 3DVV, 3SG8, 3T1H, 3T1Y, 3VET, 4DR2, 4DR4, 4EBK, 4EVY, 4GKJ, 4GKK, 4JD6, 4JYA, 4KHP, 4L47, 4L71, 4LEL, 4LF6, 4LF7, 4LF8, 4LFB, 4LFC, 4LNT, 4LSK, 4LT8, 4P6F, 4P70, 4QB9, 4TUA, 4TUB, 4TUD, 4TUE, 4V51, 4V52, 4V57, 4V5C, 4V5D, 4V5G, 4V5L, 4V5Y, 4V8C, 4V8F, 4V8J, 4V97, 4V9C, 4W29, 4WOI, 4WRA, 4WSD, 4WT8, 4X62, 4X64, 4X65, 4X66, 4XJE, 4ZC7, 5A9Z, 5AA0, 5BR8, 5CFS, 5DV4, 5EL6, 5EL7, 5IB7, 5IQD, 5IQE, 5IQR, 5NDJ, 5NDK, 5NDV, 5NDW, 5TCU, 5U0N, 5U1E, 5WNT, 5WNU, 5WNV, 5ZEJ, 6AZ1, 6AZ3, 6C5U, 6CAO, 6CAV, 6CEY, 6DTI, 6MB5, 6MB7, 6MB9, 6MKN, 6MPF, 6MPI, 6NMK, 6NML, 6NMM, 6NMN, 6NP4, 6NP5, 6NTI, 6OF6, 6OJ2, 6OPE, 6ORD, 6P04, 6P06, 6P08, 6S0S, 6S0W, 6UN8, 7K00
30 NB74 71461382 NA B?E 40S DC E, T NA NA 23148581 NA NA NA
26 TC007 11735014 485 BE 60S,
40S
PET, DC T NA NA 29208708 NA NA
1EI2, 1FJG, 1FYP, 1I9V, 1IBK, 1IBL, 1J7T, 1KNY, 1L8T, 1LC4, 1M4D, 1M4G, 1M4I, 1N32, 1N33, 1ND4, 1S3Z, 1V0C, 1VVJ, 1XMO, 1XMQ, 1XNQ, 1XNR, 2A04, 2B0Q, 2BEE, 2BUE, 2ESI, 2ESJ, 2ET4, 2ET5, 2ET8, 2F4S, 2FCX, 2FCY, 2FCZ, 2FD0, 2KXM, 2MXS, 2N0J, 2O3V, 2O3W, 2O3X, 2QIR, 2UU9, 2UUA, 2UUB, 2UUC, 2UXB, 2UXC, 2UXD, 2VQE, 2VQF, 2VQY, 3BNQ, 3BNR, 3C3Z, 3C44, 3C5D, 3C7R, 3DVV, 3KP5, 3Q5R, 3SG8, 3SG9, 3T1H, 3T1Y, 3U6T, 3VET, 4DFB, 4DFU, 4DR2, 4DR4, 4EBK, 4EM0, 4EVY, 4FEU, 4FEV, 4FEW, 4FEX, 4GKH, 4GKI, 4GKJ, 4GKK, 4JD6, 4JYA, 4KHP, 4L47, 4L71, 4LEL, 4LF6, 4LF7, 4LF8, 4LFB, 4LFC, 4LNT, 4LSK, 4LT8, 4OKN, 4P6F, 4P70, 4QB9, 4QC6, 4TUA, 4TUB, 4TUD, 4TUE, 4V51, 4V52, 4V57, 4V5C, 4V5D, 4V5G, 4V5L, 4V5Y, 4V8C, 4V8F, 4V8J, 4V97, 4V9C, 4W29, 4WOI, 4WQL, 4WRA, 4WSD, 4WT8, 4X62, 4X64, 4X65, 4X66, 4XJE, 4ZC7, 5A9Z, 5AA0, 5BR8, 5CFS, 5DV4, 5EL6, 5EL7, 5IB7, 5IQB, 5IQD, 5IQE, 5IQR, 5NDJ, 5NDK, 5NDV, 5NDW, 5TCU, 5U0N, 5U1E, 5WNT, 5WNU, 5WNV, 5Z8K, 5ZEJ, 6AZ1, 6AZ3, 6BFH, 6C5U, 6CAO, 6CAV, 6CEY, 6CTZ, 6DTI, 6E0D, 6FD2, 6JW7, 6JW8, 6MB5, 6MB7, 6MB9, 6MKN, 6MPF, 6MPI, 6NMK, 6NML, 6NMM, 6NMN, 6NP4, 6NP5, 6NTI, 6O5U, 6O97, 6OF6, 6OJ2, 6OPE, 6ORD, 6P04, 6P06, 6P08, 6S0S, 6S0V, 6S0W, 6UN8, 7K00
32 NB157 127044574 NA B?E 40S DC E, T NA NA 27096052 NA NA NA
33 NB156 127044572 NA B?E 40S DC E, T NA NA 27096052 NA NA NA
35 apramycin 3081545 540 BE 40S,
[30S]
18S (DC (G1408, A1491))
[16S (A1408, G1491)]
E NA
apramycin shows high activity for bacterial ribosomes and comparable selectivity for eukaryotic cytosolic ribosomes
USA 1 NA
1YRJ, 2G5K, 2M4Q, 2OE5, 2OE8, 4AQY, 4K31, 6MN4, 7JM2
25 neamine 72392
2-DOS aminoglycoside, 4-disubstituted
‎322 BE 60S? DC E, T D?
common core component of many aminoglycosides
NA NA
1EI2, 1FJG, 1FYP, 1GYM, 1I9V, 1IBK, 1IBL, 1J7T, 1LC4, 1M4D, 1M4G, 1N32, 1N33, 1S3Z, 1V0C, 1VVJ, 1XMO, 1XMQ, 1XNQ, 1XNR, 2A04, 2B0Q, 2BUE, 2ESJ, 2ET4, 2ET5, 2ET8, 2F4S, 2FCX, 2FCY, 2FCZ, 2FD0, 2KXM, 2MXS, 2N0J, 2O3V, 2O3W, 2O3X, 2QIR, 2UU9, 2UUA, 2UUB, 2UUC, 2UXB, 2UXC, 2UXD, 2VQE, 2VQF, 2VQY, 3BNQ, 3BNR, 3C3Z, 3C44, 3C5D, 3C7R, 3DVV, 3SG8, 3T1H, 3T1Y, 3VET, 4DR2, 4DR4, 4EBK, 4EVY, 4GKJ, 4GKK, 4JD6, 4JYA, 4KHP, 4L47, 4L71, 4LEL, 4LF6, 4LF7, 4LF8, 4LFB, 4LFC, 4LNT, 4LSK, 4LT8, 4P6F, 4P70, 4QB9, 4TUA, 4TUB, 4TUD, 4TUE, 4V51, 4V52, 4V57, 4V5C, 4V5D, 4V5G, 4V5L, 4V5Y, 4V8C, 4V8F, 4V8J, 4V97, 4V9C, 4W29, 4WOI, 4WRA, 4WSD, 4WT8, 4X62, 4X64, 4X65, 4X66, 4XJE, 4ZC7, 5A9Z, 5AA0, 5BR8, 5CFS, 5DV4, 5EL6, 5EL7, 5IB7, 5IQD, 5IQE, 5IQR, 5NDJ, 5NDK, 5NDV, 5NDW, 5TCU, 5U0N, 5U1E, 5WNT, 5WNU, 5WNV, 5Z8K, 5ZEJ, 6AZ1, 6AZ3, 6C5U, 6CAO, 6CAV, 6CEY, 6DTI, 6E0D, 6FD2, 6JW7, 6JW8, 6MB5, 6MB7, 6MB9, 6MKN, 6MPF, 6MPI, 6NMK, 6NML, 6NMM, 6NMN, 6NP4, 6NP5, 6NTI, 6OF6, 6OJ2, 6OPE, 6ORD, 6P04, 6P06, 6P08, 6S0S, 6S0V, 6S0W, 6UN8, 7K00
34 56928061
2-DOS aminoglycoside, noncanonical compound
528 BAE 40S? DC (R?) S NA NA from 60$ NA
203 CDX5-1 29556880
phthalimide group
NA NA NA NA NA NA NA 27407112 NA NA NA
241 negamycin 11118411
negamycin group
248 BAE 40S 18S T S NA 31620232 NA NA
{2QEX - archaea}, {4W2I - archaea}, {4WF1 - bacteria}
122 TCP-1109 117729068
negamycin group
402 E 40S NA T NA NA 31620232 NA NA NA
240 42831
negamycin group
232 E NA NA T NA NA 25044534 NA NA NA
239 102439777
negamycin group
345 E NA NA T NA NA 25044534 NA NA NA
190 11219835 ohhdiazoles 284 E 60S? A site? Т? NA
the termination inhibition may be an artifact due to using luciferase as a reporter;
approved for the treatment of Duchenne myodystrophy
from 40$ NA
205 amlexanox 2161
benzopyrans
298 E NA NA T NA NA 22938201 USA 3 from 38$
2KOT, 4WBO, 5W5V, 6BOD, 6CQ1
7 RTC204 864615 NA NA E NA NA T NA
a nonsense-mediated decay inhibitor; stabilizes mRNA with a nonsense mutation and promotes the synthesis of a complete copy of the protein with such mRNA
23774824 NA from 66$ NA
118 RTC219 43812630 NA NA E NA NA T NA NA 23774824 NA NA NA
120 GJ071 3192008 NA NA E
many binding sites
many binding sites
T NA
less toxic in comparison with related compounds
NA NA NA
199 GJ072 43813055 NA NA E
many binding sites
many binding sites
T NA
less toxic in comparison with related compounds
2198027
23774824
30613341
NA NA NA
200 GJ103 71748051 NA NA E NA NA T NA
less toxic in comparison with related compounds
23774824 NA from 92$ NA
9 BZ16 NA
thiazolidinone group
NA E NA NA Т NA
RTC13 derivative
SMILES: COC1=CC(=CC=C1)C2CCC(CC3SC(=S)NC3=O)O2
NA NA NA
194 BZ6 41673734
thiazolidinone group
330 E NA NA Т NA NA 21873052 NA NA 5OP9
202 RTC13 1227681
thiazolidinone group
315 E 40S?
many binding sites?
[16S]
Т NA NA NA from 30$ NA
201 RTC14 794138
thiazolidinone group
298 E
many binding sites?
NA Т NA
no in vivo activity
NA NA NA
196
QL-XII-47 / QL47
71748056 QL47 group 448 E NA NA
E (early stages)?
NA NA
inhibits protein neosynthesis initiated by both canonical cap-driven and noncanonical initiation strategies; broad-spectrum antiviral activity
31914414 NA from 197$ NA
197 YKL-04-085 137637635 QL47 group 492 E NA NA E? NA NA 31914414 NA NA NA
179 512882 macrolide 1562 BE 60S NA E NA NA 24189724 NA NA NA
126 175985 macrolide 613 E NA NA NA NA NA NA NA NA NA
213 mefloquine 4046 quinoline 378 E* 60S GAC E NA
antimalarial drug; unique mechanism fof action similar to thiostrepton and other peptide antibiotics; binds at the landing site of translational factors
28288098 NA 5UMD, 5ZNI
184 daptomycin 16134395
cyclic lipopeptide
1621 BA?E 40S eS19 NA NA NA NA 28680364 NA NA
216 161484 NA 282 E 40S? 60S? NA I
blocks translation initiation by preventing the binding of the 60S ribosomal subunit to the 48S pre-initiation complex
D
resistanse is associated with changes in ribosome components
NA NA NA
1 131917 NA 264 AE 60S E site T
inhibits the release of the nancent peptide from the polisome
NA NA NA NA 2OTL
NA edeine A NA NA 739 BAE 40S, [30S] E site I
disrupts binding or accomodation of Met-tRNA(i) in a P-site
NA
poorly penetrates into mammalian cells, there is a structure data of it's interaction with a yeast ribosome
25209664 NA ? NA
NA edeine B NA NA 781 BAE? 40S? E site? I?
disrupts binding or accomodation of Met-tRNA(i) in a P-site?
NA NA 1148278 NA ? NA
198 2794 NA 473 BE 60S NA I
disrupts binding of elF6 with 60S subunit
NA NA 31936702 from 16$ NA
195 eIFsixty-4 4531207 NA 415 E 60S NA I
disrupts binding of elF6 with 60S subunit
D
disrupts the maturation of rRNA; eIFsixty-4 analogs (eIFsixty-1 (clofazimine) and eIFsixty-6) also disrupt the binding of eIF6 to the 60S subunit, but exhibit different cytotoxicity depending on the dose and cell type
31936702 NA NA NA
116 eIFsixty-6 73253915 NA 385 NA 60S NA I
disrupts binding of elF6 with 60S subunit
NA NA 31936702 NA from 34$ NA
215 NSC111041 269624 NA 189 E NA NA NA
inhibits TDP2's binding to DNA without getting intercalated into DNA
NA NA NA NA NA
193 NSC115183 411623 NA NA E NA NA NA NA NA
did not signifcantly affect translation, the structure is currently not available
14769948 NA NA NA
192
PF-06378503 (PF8503)
138544609 NA 449 E 60S? PET? E
prevents the progress of the peptide in the ribosomal tunnel?
NA
it is highly specific to the amino acid sequence and is active against a small number of peptides
30875366 NA NA NA
191
PF-06446846 (PF846)
86271238 NA 434 BAE 60S PET E
it prevents the progress of the peptide in the ribosomal tunnel, which leads to changes in the conformation of PTC and inhibition of translocation, since the 3`-CAA end of the peptidyl-tRNA is incorrectly oriented
NA
it is highly specific to the amino acid sequence and is active against a small number of peptides
NA from 149$ NA
NA oxo-aglaiastatin NA rocaglate, a synthetic derivative of aglaiastatin NA E 60S NA NA NA
it is highly specific to the amino acid sequence and is active against a small number of peptides
32101697
NA ? NA
8 raphin1 9560222 NA 231 BAE 60S NA NA NA NA 121341
NA ? NA

Table 2. Inhibitors of translation factors and ARSases

SC Name Pubchem CIDs Class, group of chemical compounds MW Domain specifi-
city (BAE)
Target Stage affected
(IETR)
Mechanism of action Comments References Clinical trials Cost and Vendors PDB structures
131 2259
triphenylmethane
422 BAE
40S? tRNA? mRNA? eIF2-GTP-Met-tRNA(i)?
I, (E)
inhibitor of eIF2-GTP-Met-tRNA(i) complex formation, affects binding of mRNA, tRNA to ribosome, causes dissociation of ribosomes into separate subparticles, inhibits elongation factors
nonspecific inhibitor of protein-nucleic acid interactions; does not penetrate the cell membrane
NA from 60$ NA
128 gallin 191336
xanthenelike,
gallin/fluorescein
analog
366 B?A?E
40S? tRNA? mRNA?
I, (E)
inhibitor of eIF2-GTP-Met-tRNA(i) complex formation, affects binding of mRNA, tRNA to ribosome
nonspecific inhibitor of protein-nucleic acid interactions; does not penetrate the cell membrane
627208 NA NA NA
129 66993 triphenyl 386 B?A?E
40S? tRNA? mRNA? 60S? eIF2-GTP-Met-tRNA(i)?
I, (E)
inhibitor of eIF2-GTP-Met-tRNA(i) complex formation, affects binding of mRNA, tRNA to ribosome
nonspecific inhibitor of protein-nucleic acid interactions; does not penetrate the cell membrane
NA NA NA
132 NSC119889 274104
gallin/fluorescein analog
650 E?
eIF2-GTP-Met-tRNA(i)?
I
inhibitor of eIF2-GTP-Met-tRNA(i) complex formation, affects binding of mRNA, tRNA to ribosome (affects binding of Aa-tRNA?)
inhibits translation in vivo and in vitro
16928960 NA NA NA
126 NSC119893 274108
gallin/fluorescein analog
414 E?
eIF2-GTP-Met-tRNA(i)?
I
inhibitor of eIF2-GTP-Met-tRNA(i) complex formation
reversible inhibitor;
inhibits in vivo translation;
inhibits translation in vitro less effective;
NA NA NA
20 28032
uridine analog
229 BAE
eIF2, eEF2?, eIF2-GTP-Met-tRNA(i)?
I, E
inhibitor of eIF2-GTP-Met-tRNA(i) complex formation, elongation inhibitor (inhibits eEF2 activity on the ribosome)?
nonspecific inhibitor of protein-nucleic acid interactions
976261 NA NA NA
4 histidinol 776 His analog 141 BAE
His-tRNA synthetase
E
inhibitor of His-tRNA synthetase and His biosynthesis
reversible inhibitor
4338230 NA NA
1H3J, 1KAE, 1KMN, 2BKD, 2FPU, 4GYF, 4V8Y, 4V8Z, 5EQ8, 5VLC, 5YHT
17 furanomycin 73423 lle analog 157 B?A?E
Ile-tRNA synthetase
E
Ile analog, inhibitor of Ile-tRNA synthetase
NA 4861779 NA NA NA
19 ribavirin 37542 m⁷G analog 244 E eIF4E? I
perhaps, in some circumstances, it can compete with the m7G-cap for binding to eIF4E?
NA NA from 25$ NA
22 447830 Met analog 464 BAE
Met-tRNA synthetase
E
inhibitor of Met-tRNA synthetase
NA NA NA
12AS, 1AER, 1AM0, 1AMU, 1ANK, 1AW4, 1BKX, 1C0A, 1C0A, 1CGP, 1CJA, 1CT9, 1CVJ, 1CX4, 1D4R, 1DEL, 1DGS, 1DMA, 1DS5, 1E1T, 1ECJ, 1EFP, 1EFV, 1EXD, 1EYJ, 1EYK, 1FA9, 1FBP, 1FJ9, 1FNC, 1FND, 1FPD, 1FPE, 1FPF, 1FPG, 1FPI, 1FPJ, 1FPL, 1FRP, 1FSA, 1FTA, 1FVI, 1FYD, 1G51, 1G51, 1G6N, 1GGM, 1GPH, 1GPM, 1GTS, 1H1H, 1H3D, 1HDI, 1HI3, 1HTO, 1HTQ, 1HTT, 1HW5, 1I5Z, 1I6X, 1IL2, 1J20, 1J59, 1JBR, 1JID, 1JP4, 1JWB, 1K9Y, 1KA0, 1KHT, 1KPF, 1KTG, 1KZ8, 1LB2, 1LGR, 1LPC, 1LTK, 1M5V, 1MB9, 1MC1, 1MD9, 1MDB, 1MF0, 1MF1, 1MZV, 1N78, 1NH8, 1NHK, 1NKS, 1NSY, 1NV7, 1O0B, 1O0C, 1O0O, 1O3Q, 1O3R, 1O3S, 1O3T, 1O94, 1O95, 1O96, 1O97, 1OBD, 1OBG, 1OBT, 1ORE, 1P8L, 1PG3, 1PG4, 1PGQ, 1PTW, 1PYG, 1Q43, 1Q5O, 1QB8, 1QF6, 1QGX, 1RAO, 1RAW, 1RDY, 1RDZ, 1RGK, 1RGS, 1ROR, 1RUN, 1RUO, 1RY2, 1S68, 1SES, 1SK6, 1SON, 1T6Y, 1T9G, 1TB5, 1TB7, 1TBW, 1TUU, 1U6B, 1U6P, 1U9Z, 1UA4, 1UKZ, 1UUY, 1UXN, 1UXP, 1UXU, 1UXV, 1V26, 1V8S, 1V9P, 1VD1, 1VP6, 1W0H, 1WDY, 1WLE, 1WXE, 1WXI, 1X9N, 1XFW, 1XQS, 1XV6, 1Y1P, 1YKD, 1YXU, 1YYZ, 1YZ0, 1Z5U, 1Z6S, 1Z84, 1Z8D, 1ZAU, 1ZBH, 1ZBU, 1ZJW, 1ZN8, 1ZN9, 1ZRC, 1ZRD, 1ZRE, 1ZRF, 1ZZN, 2A1T, 2A1U, 2A7X, 2A86, 2AK3, 2ART, 2BWJ, 2C38, 2C5S, 2CFM, 2CGP, 2CNQ, 2D1Q, 2D1R, 2DCL, 2DEU, 2DSD, 2ECK, 2EQA, 2F17, 2F3D, 2FJB, 2G1U, 2GCS, 2GCV, 2GJW, 2GM3, 2GMK, 2GSU, 2GXQ, 2GXS, 2GZ2, 2GZW, 2H0S, 2H0W, 2H0X, 2HBL, 2HCR, 2HO6, 2HO7, 2HOJ, 2HVS, 2I4I, 2IVS, 2IVT, 2IYP, 2J91, 2J9D, 2JB7, 2JGD, 2K0G, 2KP3, 2LSC, 2N4J, 2NSY, 2OK7, 2OOX, 2OUN, 2OUR, 2OUY, 2OWO, 2OZ6, 2P20, 2P2B, 2P2F, 2P2J, 2P2M, 2P2Q, 2PTM, 2PTQ, 2PW3, 2PZA, 2Q2T, 2Q4H, 2Q8M, 2QGA, 2QJT, 2QRC, 2QRK, 2R7M, 2R84, 2R85, 2RH6, 2RIF, 2RRC, 2UV4, 2UV6, 2UV7, 2V8Q, 2V92, 2V9J, 2VAR, 2VD6, 2VFK, 2VII, 2VNI, 2VSO, 2VSX, 2VZE, 2W4Y, 2W4Z, 2WEF, 2X3K, 2X75, 2XD0, 2XDB, 2XDD, 2XOY, 2XOZ, 2XXB, 2Y8L, 2Y8Q, 2YA3, 2YAB, 2YB1, 2YDD, 2YJ4, 2YPE, 2YQ9, 2YRX, 2YS6, 2YVO, 2ZE5, 2ZE6, 2ZE7, 2ZMF, 2ZR2, 3A7A, 3A9V, 3AHW, 3AW8, 3B1R, 3B4A, 3B6J, 3BER, 3BLW, 3BO2, 3BO3, 3BO4, 3BPZ, 3C0H, 3C1Y, 3C21, 3C85, 3CJ7, 3CJ9, 3CLP, 3CLR, 3CLS, 3CLT, 3CLU, 3CW9, 3DAH, 3DDJ, 3DHV, 3DLZ, 3DQX, 3DRW, 3E3N, 3E7W, 3E7X, 3EPS, 3EQ6, 3ERR, 3ETQ, 3FEG, 3FHJ, 3FHM, 3FI0, 3FIT, 3FIU, 3FNA, 3FWZ, 3G1Z, 3G89, 3GC0, 3GLV, 3GRU, 3GYD, 3H3U, 3HF7, 3HHN, 3HW5, 3HXY, 3I0Q, 3I54, 3IB8, 3IFA, 3IFC, 3IIN, 3IUY, 3IYD, 3J7Y, 3JQP, 3JQQ, 3JTF, 3JWP, 3KCC, 3KD6, 3KFL, 3KGD, 3KH5, 3L2P, 3L31, 3L4B, 3L9W, 3LC6, 3LCB, 3LFR, 3LFZ, 3LHH, 3LKM, 3LOQ, 3LQ3, 3LUD, 3LW7, 3M84, 3MF2, 3MUV, 3MZH, 3N10, 3N4M, 3N8H, 3NEM, 3NGN, 3NGT, 3NKV, 3NQR, 3NRN, 3NUA, 3NYO, 3NYQ, 3NYR, 3NZT, 3O0F, 3O0M, 3OCP, 3OCV, 3OCX, 3OF1, 3OGJ, 3OMF, 3OTF, 3P4E, 3PCO, 3PNA, 3PWK, 3PWS, 3PY5, 3PZC, 3Q10, 3QFO, 3QH8, 3QOP, 3R1H, 3R1L, 3R6S, 3R96, 3RA8, 3RAA, 3RDI, 3REX, 3RK0, 3RL6, 3ROJ, 3ROU, 3RPH, 3RPL, 3RPQ, 3RPZ, 3RQ2, 3RRB, 3RYP, 3RYR, 3SBX, 3SF0, 3SGI, 3SHR, 3SP1, 3SPL, 3SR0, 3SYT, 3SZG, 3SZQ, 3T4B, 3T5M, 3TDH, 3TJ7, 3TLX, 3TLZ, 3TNJ, 3TSQ, 3TTF, 3TV1, 3TW2, 3TY9, 3TYX, 3U0Z, 3U10, 3U11, 3U1B, 3UK2, 3UQ6, 3UQ8, 3UY4, 3VBF, 3VER, 3VEX, 3VGJ, 3VNR, 3VNS, 3VQX, 3W1B, 3WJR, 3WUH, 3WVR, 3X01, 3X05, 3X07, 3X09, 3X0B, 3ZET, 4A2U, 4A59, 4AJC, 4AJS, 4ATO, 4AVB, 4AVC, 4AZS, 4B8S, 4BLW, 4BRF, 4BRN, 4BRQ, 4CF7, 4CFE, 4CFF, 4CFH, 4CLP, 4CLT, 4CO4, 4CS3, 4CS9, 4CT9, 4CYD, 4D05, 4D3H, 4D56, 4D57, 4D7A, 4D7T, 4DG8, 4E6N, 4EAI, 4EAJ, 4EAL, 4EBU, 4EEI, 4EFC, 4EG3, 4EPM, 4EQ4, 4EQ5, 4EQL, 4EUM, 4EV0, 4EYS, 4FBC, 4FBH, 4FBP, 4FF4, 4FRY, 4FT8, 4FWK, 4G0Y, 4G8L, 4GA6, 4GBV, 4GBW, 4GQY, 4GTW, 4GVL, 4GWS, 4GWY, 4GWZ, 4GX4, 4GX6, 4H2S, 4H2V, 4H2W, 4H46, 4HBN, 4HE2, 4HG0, 4HV4, 4HVJ, 4HXV, 4HZF, 4I01, 4I02, 4I09, 4I0A, 4I0B, 4I5W, 4IFZ, 4IG1, 4IJN, 4IKE, 4IMY, 4INI, 4ITR, 4JZK, 4K46, 4K9A, 4K9B, 4KBF, 4KFS, 4KKE, 4KR2, 4KXP, 4LFZ, 4LI4, 4LQY, 4M0K, 4M30, 4M9D, 4MA0, 4MGI, 4MGK, 4MPO, 4MX2, 4MX3, 4NDF, 4NDH, 4NDI, 4NNJ, 4NYB, 4NYC, 4NYD, 4NYG, 4O6R, 4O81, 4O82, 4O83, 4OKE, 4OXI, 4OZL, 4P1G, 4P5J, 4P69, 4PEH, 4PLX, 4Q86, 4QAK, 4QEI, 4QFG, 4QFR, 4QFS, 4QK8, 4QK9, 4QKA, 4QLM, 4QLN, 4QSH, 4QSK, 4QX5, 4R1L, 4R1M, 4R3W, 4R78, 4R8I, 4RDH, 4RDX, 4RER, 4REW, 4RLE, 4RMO, 4RVN, 4RWW, 4S1B, 4TS5, 4TWB, 4U3N, 4UP7, 4UUW, 4V1U, 4W90, 4W92, 4WB2, 4WB3, 4WCC, 4WDA, 4WDB, 4WDF, 4WDG, 4WER, 4WFR, 4WK1, 4WW7, 4WYP, 4X44, 4X45, 4XJE, 4XTT, 4Y5Q, 4YAF, 4YAL, 4YAO, 4YAU, 4YAW, 4YB6, 4YE2, 4YED, 4YP1, 4YS2, 4YXM, 4ZCF, 4ZGL, 4ZHX, 4ZKL, 4ZMF, 4ZXI, 5AHW, 5B6H, 5B8H, 5BPH, 5BSR, 5BTX, 5BU2, 5BUS, 5BYF, 5C6C, 5CFN, 5CIZ, 5CK7, 5COT, 5D0N, 5D1F, 5D4D, 5D4N, 5D4O, 5DJH, 5DJI, 5DRK, 5DS7, 5DW8, 5DY9, 5DYJ, 5DZT, 5E6M, 5E7J, 5ED3, 5ED6, 5ERS, 5ET6, 5EY8, 5EY9, 5EYT, 5F1F, 5F1G, 5F29, 5F5X, 5F74, 5F9Y, 5FBB, 5FCB, 5FDU, 5FDV, 5G40, 5G5X, 5GJU, 5GMD, 5GME, 5GTD, 5GXD, 5GYZ, 5GZ5, 5GZW, 5IE3, 5IFI, 5IKP, 5IPP, 5ISO, 5J3U, 5JDA, 5JH2, 5JJU, 5JMV, 5JRH, 5K27, 5K85, 5K8F, 5K8S, 5K99, 5KBF, 5KJX, 5KJY, 5KKG, 5KLZ, 5KOD, 5KQ5, 5KS7, 5L3Q, 5L6V, 5L95, 5LCD, 5LDM, 5LMO, 5LWJ, 5M45, 5MKO, 5MSC, 5MSD, 5MSQ, 5MSS, 5MST, 5MSW, 5N5U, 5N9X, 5NC8, 5NRH, 5NRI, 5NX9, 5O1U, 5O3Q, 5O3R, 5O4P, 5O4Z, 5O70, 5OFU, 5OW0, 5SVB, 5SXS, 5T5T, 5T8S, 5T8T, 5TVA, 5U6P, 5U7V, 5UDT, 5UFU, 5URI, 5UXF, 5V0I, 5VEO, 5VYZ, 5VZ0, 5W10, 5WM2, 5WM7, 5WS9, 5WSB, 5WSC, 5X0B, 5X0E, 5X0F, 5X0G, 5X0J, 5X0K, 5X8F, 5XET, 5XSN, 5XSP, 5YFU, 5YFV, 5YFW, 5YFX, 5YG8, 5YG9, 5YGA, 5YZ2, 5ZBK, 5ZBL, 5ZQ4, 5ZQ7, 5ZSN, 5ZU7, 5ZWK, 6A03, 6AEK, 6AIC, 6ANG, 6AVH, 6AWA, 6AX8, 6B1U, 6B2E, 6B6H, 6BKF, 6BKG, 6BLJ, 6C9F, 6C9G, 6C9H, 6C9J, 6CFF, 6CJU, 6CVO, 6CVP, 6CVQ, 6CVR, 6CVS, 6CVT, 6CY7, 6CZM, 6D31, 6DFE, 6DT1, 6DT4, 6DZG, 6E4T, 6E4U, 6E4W, 6E5Y, 6E8O, 6EA3, 6EH2, 6EOF, 6EP0, 6ESA, 6ETD, 6ETF, 6ETH, 6EZU, 6EZU, 6F2V, 6FCL, 6FD5, 6FD6, 6FD9, 6GAX, 6GB0, 6GB4, 6GB9, 6GBC, 6GBF, 6GDR, 6GPB, 6GPO, 6GPR, 6GQU, 6GYO, 6H1B, 6H4G, 6H7E, 6HE0, 6HE2, 6HQ3, 6HQ4, 6HQ5, 6HVL, 6HVL, 6III, 6IJB, 6ITO, 6IYF, 6J53, 6J58, 6JWQ, 6JWR, 6JWT, 6JWU, 6JWW, 6JWX, 6JWZ, 6K4R, 6K5L, 6K8K, 6KBY, 6KDU, 6KJM, 6KRH, 6KSC, 6L5M, 6LN3, 6LS5, 6M11, 6MMO, 6MMQ, 6MN8, 6MV7, 6N5K, 6N5L, 6N5N, 6N5O, 6N5P, 6N5Q, 6N5R, 6N5S, 6N5T, 6NAB, 6NE7, 6NFE, 6NMM, 6NMN, 6O0W, 6O3P, 6O6Q, 6O6Y, 6O6Y, 6O6Z, 6O70, 6O70, 6OF6, 6OFB, 6OMS, 6OQQ, 6OV0, 6OZ1, 6OZV, 6P08, 6P09, 6P0A, 6P0B, 6P0C, 6P0D, 6P0E, 6P4U, 6P63, 6P6U, 6P8Q, 6PB4, 6PB5, 6PB6, 6PJW, 6PLM, 6PMH, 6PMT, 6Q1V, 6QJZ, 6QL9, 6QUL, 6R8U, 6RAR, 6RAS, 6RAU, 6RCE, 6RMS, 6RNT, 6S2U, 6SHQ, 6SI8, 6SIW, 6SIY, 6SLT, 6SQ8, 6SVS, 6SY7, 6TM4, 6U7B, 6UFH, 6UQF, 6UQG, 6VPM, 6VT1, 6VT8, 6VTE, 6W6Y, 6WFJ, 6X7U, 6XNV, 6YMI, 6YML, 7BUM, 7CBB, 7GPB, 7JME, 7RNT, 8GPB
1 129856568 Met analog 228 BAE
Met-tRNA synthetase
E
inhibitor of Met-tRNA synthetase
NA 9934462 NA NA NA
3 ethionine 25674 Met analog 163 BAE
Met-tRNA synthetase
I, E
inhibitor of Met-tRNA synthetase, disrupts ATP metabolism in the cell
NA 6752686 NA from 59$
1ABW, 1C21, 1D6S, 1F4L, 1G8S, 1INN, 1J6W, 1J6X, 1KBG, 1KQ0, 1KQ9, 1KSF, 1O9T, 1P1M, 1P7L, 1P99, 1PG2, 1Q7E, 1QQ9, 1RQR, 1TKJ, 1U1H, 1U1J, 1WKM, 1XS5, 1Y9Q, 1YJ3, 1ZUE, 2AJH, 2C5B, 2C5H, 2CIJ, 2FB3, 2GGC, 2P6S, 2Q33, 2Q6I, 2Q6L, 2QS8, 2V7X, 2VC1, 2WZ5, 2X1L, 2X1M, 3AEJ, 3AEM, 3AEN, 3AYL, 3C8F, 3F3D, 3GP4, 3GXA, 3H99, 3IIX, 3IR1, 3J81, 3JAP, 3JAQ, 3K2D, 3MX6, 3QSY, 3R8X, 3TJW, 3TQW, 3TRV, 3TRY, 3V11, 3VK3, 4EG1, 4EG4, 4EG5, 4EG6, 4EG7, 4EG8, 4EGA, 4FO8, 4GLS, 4GLU, 4IB2, 4IO6, 4JBL, 4L61, 4L65, 4MVW, 4MVX, 4MVY, 4MW0, 4MW1, 4MW2, 4MW4, 4MW5, 4MW6, 4MW7, 4MW9, 4MWB, 4MWC, 4MWD, 4MWE, 4OIJ, 4OIK, 4QFO, 4QHQ, 4QYM, 4R34, 4S27, 4U6J, 4U75, 4WCX, 4XN4, 4XO4, 4YAH, 4YTG, 4ZT2, 4ZT3, 4ZT4, 4ZT5, 4ZT6, 4ZT7, 5A1I, 5AGR, 5AGS, 5AGT, 5B6I, 5CGN, 5CGO, 5CPD, 5E68, 5ECP, 5EXK, 5FEW, 5FEX, 5FEZ, 5FF0, 5GOY, 5HHD, 5HR6, 5HR7, 5I1N, 5I1O, 5I1P, 5I1S, 5I5A, 5I5B, 5INX, 5IQR, 5J58, 5J59, 5J5A, 5JB3, 5JBH, 5LTX, 5NFH, 5TGS, 5TH5, 5TQU, 5TSU, 5TU6, 5URB, 5V1T, 5V49, 5VSM, 5XPK, 5YOH, 5YOI, 5YPD, 5YR7, 5YXF, 6AHI, 6BV4, 6CML, 6CNU, 6DZX, 6FD2, 6FYX, 6FYY, 6GSM, 6GSN, 6GYP, 6HTK, 6HTM, 6HTO, 6I8C, 6JF1, 6JV7, 6KP1, 6MES, 6OJA, 6PHM, 6PHN, 6PHQ, 6R8A, 6SPO, 6SPQ, 6SW9, 6SWC, 6SWX, 6TDO, 6TDQ, 6VD0, 6VE8, 6WDE, 6WOO, 6XI9, 7CCG
2 352864 Met analog 164 BE
Met-tRNA synthetase
E
inhibitor of Met-tRNA synthetase
NA 9934462 NA NA NA
127 gallein 73685
fluorescein/gallin analogs
648 E? I?
inhibitor of eIF2-GTP-Met-tRNA(i) complex formation, affects binding of mRNA, tRNA to ribosome
NA 14769948 NA from 45$ NA
135 NSC119910 274122
fluorescein/gallin analogs
370 E?
40S? tRNA? mRNA?
I, E? NA 14769948 NA NA NA
133 NSC119911 274123
fluorescein/gallin analogs
314 E?
40S? tRNA? mRNA?
I, E? NA 14769948 NA NA NA
134 NSC119913 274125
fluorescein/gallin analogs
394 E?
40S? tRNA? mRNA?
I, E? NA 14769948 NA NA NA
136 NSC119915 274127
fluorescein/gallin analogs
316 E?
40S? tRNA? mRNA?
I, E? NA 14769948 NA NA NA
130 NSC378139 16212338
fluorescein/gallin analogs
532 E?
40S? tRNA? mRNA?
I, E?
inhibitor of eIF2-GTP-Met-tRNA(i) complex formation and/or inhibit 43S preinitiation complex formation
NA 14769948 NA NA NA
97 CM16 910172
beta-carboline
252 E eIF1AX, eIF3 I
inhibits the activity of initiator factors eIF1AX and eIF3?
NA 28322844 NA from 20$ NA
111 ternatin 5459184
diterpene alkaloid
‎374 E eEF1A E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
NA 26651998 NA NA NA
110 ochratoxin A 442530 isocoumarin 404 BAE
Phe-tRNA synthetase
E
inhibitor of Phe-tRNA synthetase
NA 22069596 NA from 124$ NA
99 pateamine A 10053416 macrodiolide 556 E eIF4A I
inhibits the binding of eIF4A to eIF4G, promotes the formation of a stable complex of eIF4A with eIF4B
suppresses cap-dependent and eIF4G-dependent IRES-directed translation initiation and promotes the formation of stress granules
NA NA NA
21 456511
nucleoside amidophosphite
473 E
Pro-tRNA synthetase?
E
inhibitor of Pro-tRNA synthetase
NA 12678775 NA NA 1H4S, 2I4M
15 11499245 oxaboroles 152 E
Leu-tRNA synthetase
E
inhibitor of Leu-tRNA synthetase
NA 21856301 USA 6 from 35$ NA
35 borrelidin 6436801 polyketide 490 BAE
Thr-tRNA synthetase
E
selective inhibitor of Thr-tRNA synthetase
NA 25824639 NA from 203$ NA
18 52952025 polyketide 489 E (eIF2) I
presumably, it binds to the initiator factor eIF2 and affects its activity?
NA 30063768 NA NA NA
112 5377963 polyketide 538 BAE tRNA E
with high affinity binds almost all tRNAs, inhibiting their aminoacylation
NA 9257649 NA NA NA
9 9939559 polyketide 661 E
Ile-tRNA synthetase
E
inhibitor of Ile-tRNA synthetase
effective against mature osteoblasts
NA from 468$ NA
10 11848157 polyketide 503 E
Ile-tRNA synthetase
E
inhibitor of Ile-tRNA synthetase
NA 17929337 NA NA NA
138 arnamial 44557095
polyketide-sesquiterpene
449 E eEF2 NA fungicide 31042251 NA NA NA
114 DDD107498 71748268
quinoline derivative
581 NA eEF2 E
antimalarial drug
26085270 USA 2 from 85$ NA
24 sordarin 485851 sordarin 493 E* eEF2 E
11158355
12692531 (complex with eEF2)
9452424
973
6549
NA NA NA
30 GW 471552 216471
sordarin derivatives
472 E* eEF2 E fungicide 11600368 NA NA NA
29 GW 471558 101143375
sordarin derivatives
472 E* eEF2 E fungicide 11600368 NA NA NA
26 GW 479821 101143570
sordarin derivatives
552 E* eEF2 E fungicide 11600368 NA NA NA
27 GW 515716 101143571
sordarin derivatives
486 E* eEF2 E fungicide 11600368 NA NA NA
28 GW 570009 101143572
sordarin derivatives
484 E* eEF2 E fungicide 11600368 NA NA NA
32 GW 587270 132472117
sordarin derivatives
506 E* eEF2 E fungicide 11600368 NA NA NA
13 470278
sesquiterpene
295 E eIF4A I
inhibits eIF4A ATP-activity
NA 28757063 NA NA NA
137 elisabatin A 397069
sesquiterpene
310 E eIF4A I
inhibits eIF4A ATP-activity
NA 28757063 NA NA NA
33 hippuristanol 9981822 steroid 463 E eIF4A I
inhibits eIF4A; allosteric inhibitor; blocks eIF4AI in a closed state, preventing its transition to the open state required for eIF4AI's helicase activity
exhibits antiviral activity, potential anticancer drug
27335721 NA NA NA
34 fusidic acid 3000226 steroid 516 BA(E) (eEF2) E
inhibits GTP-eEF2-dependent translocation? (probably, nonspecific)
NA 171159 from 40$
1Q23, 1QCA, 2VUF, 4V5F, 4V5M, 4V5N, 4V7B, 4V8U, 4V9L, 4V9M, 4W29, 4WQF, 5JMN, 6Q4N, 6Q4O, 6Q4P
139 5251303
polyketide-sesquiterpene
312 E eEF2 NA fungicide 31042251 NA NA NA
11 febrifugine 115723
quinazolinone alkaloid
301 NA
Pro-tRNA synthetase
E
inhibitor of Pro-tRNA synthetase
NA 22327401 NA from 235$ NA
12 halofuginone 400772 415 NA
Pro-tRNA synthetase
E
inhibitor of Pro-tRNA synthetase
anti-inflammatory and antiprotozoal agent
22327401 NA from 106$
4HVC, 4K88, 4OLF, 4Q15, 4YDQ, 5F9Z, 5XIO, 5XIP, 5XIQ, 5ZNJ, 6MN8, 6UYH
98 439647
chloromethyl ketone
352 BAE? eEF1A? E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
[binds to bacterial Ef-Tu and inhibits binding activity for Aa-tRNA]
NA [DOI] NA from 41$ NA
53 bouvardin 429598 773 E eEF2 E
blocks eEF2 dissociation from the ribosome
NA NA NA NA
47 13361282
cyclic peptides, bouvardin groups
757 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA from 566$ NA
44 125769
cyclic peptides, bouvardin groups
787 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA NA NA
45 RA I 14390137
cyclic peptides, bouvardin groups
773 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA NA NA
46 RA II NA
cyclic peptides, bouvardin groups
NA E? eEF2? E
blocks eEF2 dissociation from the ribosome?
SMILES: O=C1[C@H]2CC(C=C3)=CC=C3CC4=C(C)C=CC(C[C@H](C(N[C@H](C)C(N[C@H](C)C(N(C)[C@@H](C(N[C@H](C)C(N2C)=C)=O)CC5=CC=CC=C5)=O)=O)=O)N1C)=C4
7922127 NA NA NA
43 RA III 14390141
cyclic peptides, bouvardin groups
787 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA NA NA
52 RA IV NA
cyclic peptides, bouvardin groups
NA E? eEF2? E
blocks eEF2 dissociation from the ribosome?
SMILES: O=C1[C@H]2CC(C=C3)=CC=C3CC4=C(C)C=CC([C@H](O)[C@H](C(N[C@H](C)C(N[C@H](C)C(N(C)[C@@H](C(N[C@H](C)C(N2C)=C)=O)CC5=CC=C(C)C=C5)=O)=O)=O)N1C)=C4
7922127 NA NA NA
48 13361282
cyclic peptides, bouvardin groups
757 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA from 566$ NA
NA RA VI NA
cyclic peptides, bouvardin groups
NA E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA ? NA
50 RA VII 3034401
cyclic peptides, bouvardin groups
771 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA from 566$ NA
51 RA VIII 101450177
cyclic peptides, bouvardin groups
801 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA NA NA
NA RA IX NA
cyclic peptides, bouvardin groups
NA E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA ? NA
55 RA X 6444175
cyclic peptides, bouvardin groups
829 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA NA NA
42 RA XI 131676023
cyclic peptides, bouvardin groups
815 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA NA NA
40 RA XII 14033269
cyclic peptides, bouvardin groups
919 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA from 237$ NA
41 RA XIII 60208884
cyclic peptides, bouvardin groups
977 E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA NA NA
NA RA XIV NA
cyclic peptides, bouvardin groups
NA E? eEF2? E
blocks eEF2 dissociation from the ribosome?
NA 7922127 NA ? NA
49 SVC112 10055891 NA E? eEF2? NA NA 31911553 NA NA NA
23 GM193663 477019
cyclic diterpene glycoside, sordarin analog
503 E* eEF2 E
fungicide, no effect on mammals
NA NA NA
31 49867325
cyclic diterpene glycoside, sordarin analog
691 E* eEF2 E fungicide NA NA 2NPF
25 GR135402 6444409
cyclic diterpene glycoside, sordarin analog
601 E* eEF2 E
fungicide, no effect on mammals
NA NA NA
39 9812534
cyclic peptide
1110 E eEF1A E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
anti-cancer agent
27713531 USA 7, EU 8 NA 5LZS
38 didemnin B 122651
cyclic peptide
1112 E eEF1A E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
does not inhibit the delivery of aminoacyl-tRNA
NA NA 5LZS
54 122204196
cyclic peptide
817 E eEF1A E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
NA NA NA NA
37 11073155
cyclic peptide
1056 E eEF1A E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
NA NA NA 5LZS
36 10724794
cyclic peptide
1042 E eEF1A E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
NA NA NA 5LZS
108 cytotrienin A 11966097
cyclic peptide
649 E eEF1A E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
causes ribotoxic stress
20943818 NA NA NA
104 5282069
cyclic peptide, ansamycin
637 E* eEF1A E?
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
NA 21448188 NA NA NA
107 6447675
cyclic peptide, ansamycin
639 E eEF1A E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
NA NA from 468$ NA
8 70681187
cyclic peptide, ansamycin
NA NA eEF1A? NA
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis?
a novel analogue of trienomycin; anticancer activity
22162786 NA NA NA
103 6438814
cyclic peptide, ansamycin
623 E eEF1A? E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
NA NA NA NA
102 139590120
cyclic peptide, ansamycin
NA NA NA NA
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis?
a novel analogue of trienomycin; anticancer activity
30132670 NA NA NA
101 139590121
cyclic peptide, ansamycin
NA NA NA NA
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis?
a novel analogue of trienomycin; anticancer activity
30132670 NA NA NA
100 139590122
cyclic peptide, ansamycin
NA NA NA NA
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis?
a novel analogue of trienomycin; anticancer activity
30132670 NA NA NA
106 trierixin 24180439
cyclic peptide, ansamycin
685 E eEF1A? E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
NA NA NA NA
105 102596141
cyclic peptide, ansamycin
683 E eEF1A? E
stabilize eEF1A comples with Aa-tRNA on a ribosome after GTP hydrolysis
NA NA NA NA
57 4E1RCat 78357788 NA 479 E eIF4E-eIF4G I
binds to the initiator factor eIF4E and inhibits the formation of a complex with eIF4G
NA 21191102 NA from 48$ NA
56 4E2RCat 2287236 NA 456 E eIF4E-eIF4G I
binds to the initiator factor eIF4E and inhibits the formation of a complex with eIF4G
NA 21507972 NA from 155$ NA
109 4EGI-1 5717952 NA 451 E eIF4E-eIF4G I
binds to the initiator factor eIF4E and inhibits the formation of a complex with eIF4G
NA 17254965 NA from 56$ NA
71 rocaglamide 331783 NA 506 E eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA, inhibiting the eIF4A helicase activity
NA NA from 235$ 5ZC9
87 WDG57-591 NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3(C4=CC=C(OC)C=C4)[C@@]2(O)[C@H](O)[C@H](C(N(C)OC)=O)[C@H]3C5=CC=CC=C5)=CC(OC6O[C@@H]([C@@H](CO)O)CO[C@H]6OC)=C1
30504817 NA NA NA
92
CMLD012073
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC(=O)[C@@H]1[C@@H](C2=CC=CC=C2)[C@@]2(OC3=CC(OC)=CC(OC)=C3[C@@]22NC(C)=N[C@@]12O)C1=CC=C(OC)C=C1
30504817 NA NA NA
77 SDS-1-0-21 NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: CONC(=O)[C@H]1[C@@H](O)[C@@]2(O)C3=C(O[C@]2([C@@H]1C1=CC=CC=C1)C1=CC=C(Br)C=C1)C=C(OC)C=C3OC
30504817 NA NA NA
85 WDG57-590 NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3(C4=CC=C(OC)C=C4)[C@@]2(O)[C@H](O)[C@H](C(NOC)=O)[C@H]3C5=CC=CC=C5)=CC(OC6O[C@@H]([C@@H](CO)O)CO[C@H]6OC)=C1
30504817 NA NA NA
78
CMLD010510
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3(C4=CC=C(Br)C=C4)[C@@]2(O)[C@H](O)[C@H](C(N(C)OC)=O)[C@H]3C5=CC=CC=C5)=CC(OC)=C1
30504817 NA NA NA
91
CMLD012072
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC(=O)[C@@H]1[C@@H](C2=CC=CC=C2)[C@@]2(OC3=CC(OC)=CC(OC)=C3[C@@]22NC(=N[C@@]12O)C1CC1)C1=CC=C(OC)C=C1
30504817 NA NA NA
63
CMLD012150
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC(=O)[C@@H]1[C@@H](C2=CC=CC=C2)[C@@]2(OC3=CC(OC)=CC(OC)=C3[C@@]22NC(=N[C@@]12O)C1=CSC(C)=N1)C1=CC=C(OC)C=C1
30504817 NA NA NA
90
CMLD012118
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC(=O)[C@@H]1[C@@H](C2=CC=CC=C2)[C@@]2(OC3=CC(OC)=CC(OC)=C3[C@@]22NC(=N[C@@]12O)N1CCOCC1)C1=CC=C(OC)C=C1
30504817 NA NA NA
120
BUCMD00209
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC2=C(C(OC)=C1)[C@]1(O)C3=C([C@@H](C4=CC=CC=C4)[C@@]1(O2)C1=CC=C(Br)C=C1)C(=O)N1CCC[C@H]1N3
30504817 NA NA NA
116
BUCMD00211
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC2=C(C(OC)=C1)[C@]1(O)C3=C([C@@H](C4=CC=CC=C4)[C@@]1(O2)C1=CC=C(Br)C=C1)C(=O)N1CCC[C@H]1O3
30504817 NA NA NA
79
CMLD010511
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3(C4=CC=C(Br)C=C4)[C@@]2(O)[C@H](O)[C@H](C(OC)=O)[C@H]3C5=CC=CC=C5)=CC(OC)=C1
30504817 NA NA NA
73
CMLD010513
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3(C4=CC=C(OC)C=C4)[C@@]2(O)[C@H](O)[C@H](C(NOC)=O)[C@H]3C5=CC=CC=C5)=CC(OC)=C1
30504817 NA from 998$ 5ZC9
115
CMLD012108
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC=C(C=C1)[C@@]12OC3=CC(OC)=CC(OC)=C3[C@]1(O)C1=C([C@H]2C2=CC=CC=C2)C(=O)N2CCC[C@H]2N1CCN(C)C
30504817 NA NA NA
62
CMLD012151
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC(=O)[C@@H]1[C@@H](C2=CC=CC=C2)[C@@]2(OC3=CC(OC)=CC(OC)=C3[C@@]22NC(=N[C@@]12O)C1=CC=C(OC)C=C1)C1=CC=C(OC)C=C1
30504817 NA NA NA
74 RHT NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3(C4=CC=C(OC)C=C4)[C@@]2(O)[C@H](O)[C@H](C(N(C)OC)=O)[C@H]3C5=CC=CC=C5)=CC(OC)=C1
30504817 NA NA 5ZC9
89
CMLD010514
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: [H]O[C@@H]1[C@@H]([C@@H](C2=CC=CC=C2)[C@@]2(OC3=CC(OC)=CC(OC)=C3[C@]12O[H])C1=CC=C(OC)C=C1)C(=O)N([H])OCCOCCOCCN=[N+]=[N-]
30504817 NA NA NA
61
CMLD012152
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC(=O)[C@@H]1[C@@H](C2=CC=CC=C2)[C@@]2(OC3=CC(OC)=CC(OC)=C3[C@@]22NC(=N[C@@]12O)C1=CC=CN=C1)C1=CC=C(OC)C=C1
30504817 NA NA NA
75 CR-1-31-b NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: CONC(=O)[C@H]1[C@@H](O)[C@@]2(O)C3=C(O[C@]2([C@@H]1C1=CC=CC=C1)C1=CC=C(OC)C=C1)C=C(OC)C=C3OC
30504817 NA from 998$ NA
123
CMLD010482
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC(F)=CC2=C1[C@]1(O)C3=C([C@@H](C4=CC=CC=C4)[C@@]1(O2)C1=CC=C(Br)C=C1)C(=O)N1CCC[C@@]1(C)N3
30504817 NA NA NA
59
CMLD011410
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: O[C@@]12[C@@]([C@H](C3=CC=CC=C3)[C@@H](C(C4=C(OC)C=CC=C4)=O)[C@H]2O)(C5=CC=C(OC)C=C5)OC6=CC(OC)=CC(OC)=C61
30504817 NA NA NA
80
CMLD010335
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: CONC(=O)[C@H]1[C@@H](O)[C@@]2(O)C3=C(O[C@]2([C@@H]1C1=CC=CC=C1)C1=CC=C(Br)C=C1)C=C(F)C=C3OC
30504817 NA NA 5ZC9
117
CMLD010535
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: [H]OC12C3=C([C@@H](C4=CC=CC=C4)[C@@]1(OC1=CC(OC)=CC(OC)=C21)C1=CC=C(OC)C=C1)C(=O)N1CCC[C@@]1([H])O3
30504817 NA NA NA
58
CMLD011408
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: O[C@@]12[C@@]([C@H](C3=CC=CC=C3)[C@@H](C(C4=CC5=C(C=CC=C5)O4)=O)[C@H]2O)(C6=CC=C(OC)C=C6)OC7=CC(OC)=CC(OC)=C71
30504817 NA NA NA
121
CMLD010503
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC=C(C=C1)[C@@]12OC3=CC(OC)=CC(OC)=C3[C@]1(O)C1=C([C@H]2C2=CC=CC=C2)C(=O)N2CCC[C@H]2N1
30504817 NA NA NA
66
CMLD010536
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC=C(C=C1)[C@@]12OC3=CC(OC)=CC(OC)=C3[C@]1(O)[C@H](O)[C@@H]([C@H]2C1=CC=CC=C1)C(=O)C1=CC=CO1
30504817 NA NA NA
65
CMLD011404
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: O[C@@]12[C@@]([C@H](C3=CC=CC=C3)[C@@H](C(C4=CC=C(C)O4)=O)[C@H]2O)(C5=CC=C(OC)C=C5)OC6=CC(OC)=CC(OC)=C61
30504817 NA NA NA
72
CMLD005522
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3(C4=CC=C(OC)C=C4)[C@@]2(O)[C@H](O)[C@H](C(NOC)=O)[C@H]3C5=CC=CC=C5)=CC(OC)=C1
30504817 NA from 998$ NA
82
BUCMD00003
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: CONC(=O)[C@H]1[C@@H](O)[C@@]2(O)C3=C(O[C@]2([C@@H]1C1=CC=CC=C1)C1=CC=C(Br)C=C1)C=C(O)C=C3OC
30504817 NA NA NA
88
CMLD010512
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: [H]O[C@@H]1[C@@H]([C@@H](C2=CC=CC=C2)[C@@]2(OC3=CC(OC)=CC(OC)=C3[C@]12O[H])C1=CC=C(OC)C=C1)C(=O)N([H])CCCC(OC)OC
30504817 NA NA 5ZC9
118
BUCMD00210
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC2=C(C(OC)=C1)[C@]1(O)C3=C([C@@H](C4=CC=CC=C4)[C@@]1(O2)C1=CC=C(Br)C=C1)C(=O)N1CCC[C@@H]1N3
30504817 NA NA NA
83
CMLD010338
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3([C@@H]([C@H]([C@@H](O)[C@@]23O)C2=NOC(C)=N2)C2=CC=CC=C2)C2=CC=C(Br)C=C2)=CC(F)=C1
30504817 NA NA NA
95
CMLD011886
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC=C(C=C1)[C@@]12OC3=CC(OC)=CC(OC)=C3[C@]1(O)[C@H](O)[C@@H]([C@H]2C1=CC=CC=C1)C(O)=O
30504817 NA from 446$ NA
60
CMLD012075
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC(=O)[C@@H]1[C@@H](C2=CC=CC=C2)[C@@]2(OC3=CC(OC)=CC(OC)=C3[C@@]22NC(=N[C@@]12O)C1=CC=CC=C1)C1=CC=C(OC)C=C1
30504817 NA NA NA
68
CMLD012049
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC=C(C=C1)[C@@]12OC3=CC(OC)=CC(OC)=C3[C@]1(O)[C@@H](O)[C@@H]([C@H]2C1=CC=CC=C1)C(=O)C1=CC=CO1
30504817 NA NA NA
122
CMLD011353
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: [H][C@@]12CCCN1C(=O)C1=C(N2)[C@@]2(O)C3=C(C[C@]2([C@@H]1C1=CC=CC=C1)C1=CC=C(Br)C=C1)C=C(F)C=C3OC
30504817 NA NA NA
69
CMLD012187
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC=C(C=C1)[C@@]12OC3=CC(OC)=CC(OC)=C3[C@]1(O)[C@H](O)[C@@H]([C@H]2C1=CC=CC=C1OC)C(=O)C1=CC=CO1
30504817 NA NA NA
125
CMLD009433
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3(C4=CC=C(OC)C=C4)[C@@]2(O)C5=C(C(O)=NN5)[C@H]3C6=CC=CC=C6)=CC(OC)=C1
30504817 NA NA NA
93
CMLD010500
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3(C4=CC=C(Br)C=C4)[C@@]2(O)[C@H]5[C@H](C(O5)=O)[C@H]3C6=CC=CC=C6)=CC(OC)=C1
30504817 NA NA NA
119
CMLD012107
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC=C(C=C1)[C@@]12OC3=CC(OC)=CC(OC)=C3[C@]1(O)C1=C([C@H]2C2=CC=CC=C2)C(=O)N2CCC[C@H]2N1C
30504817 NA NA NA
64
CMLD011406
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: O[C@@]12[C@@]([C@H](C3=CC=CC=C3)[C@@H](C(C4=CC=C(CCC)O4)=O)[C@H]2O)(C5=CC=C(OC)C=C5)OC6=CC(OC)=CC(OC)=C61
30504817 NA NA NA
70
CMLD012186
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: CON(C)C(=O)[C@H]1[C@@H](O)[C@@]2(O)C3=C(O[C@]2([C@@H]1C1=CC=CC=C1OC)C1=CC=C(OC)C=C1)C=C(OC)C=C3OC
30504817 NA NA 5ZC9
84
CMLD010336
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3([C@@H]([C@H]([C@@H](O)[C@@]23O)C2=NC(C)=NO2)C2=CC=CC=C2)C2=CC=C(Br)C=C2)=CC(F)=C1
30504817 NA NA NA
76
CMLD011610 (RHT)
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: CON(C)C(=O)[C@H]1[C@@H](O)[C@@]2(O)C3=C(O[C@]2([C@@H]1C1=CC=CC=C1)C1=CC=C(OC)C=C1)C=C(OC)C=C3OC
30504817 NA NA 5ZC9
81
CMLD011891
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC(=O)[C@H]1[C@@H](O)[C@@]2(O)C3=C(O[C@]2([C@@H]1C1=CC=CC=C1)C1=CC=C(Br)C=C1)C=C(O)C=C3OC
30504817 NA NA NA
94
CMLD011885
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC=C(C=C1)[C@@]12OC3=CC(OC)=CC(OC)=C3[C@]1(O)[C@H](O)[C@@H]([C@H]2C1=CC=CC=C1)C(O)=O
30504817 NA from 446$ NA
96 FL3 NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=CC2=C(C(OC)=C1)[C@]1(O)[C@H](O)C[C@@H](C3=CC=CC=C3)[C@@]1(O2)C1=CC=C(Br)C=C1
30504817 NA NA NA
67
CMLD011407
NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: O[C@@]12[C@@]([C@H](C3=CC=CC=C3)[C@@H](C(C4=NC=CN4C)=O)[C@H]2O)(C5=CC=C(OC)C=C5)OC6=CC(OC)=CC(OC)=C61
30504817 NA NA NA
124 NA rocaglates NA E? eIF4A I
inhibits eIF4A; stabilizes the eIF4A complex with RNA?
SMILES: COC1=C2C(O[C@]3(C4=CC=C(OC)C=C4)[C@@]2(O)C5=C(C(O)=NN5)[C@H]3C6=CC=CC=C6)=CC(OC)=C1
30504817 NA NA NA
86 silvestrol 11787114 rocaglates 655 E eIF4A I
inhibits eIF4A helicase activity
NA NA from 987$ NA
6
GC7 / N1–guanyl–1,7–diaminoheptane
448393
spermidine analog
172 BAE DHPS/eIF5A I
inhibitor of deoxyhypusine synthase (DHPS), which necessary for the synthesis of hypusine and posttranslational modification of eIF5A
NA 25218134 NA NA NA
113
CNI1493 / semapimod
5745214 anilide 745 E DHPS/eIF5A E
inhibitor of deoxyhypusine synthase (DHPS), which necessary for the synthesis of hypusine and posttranslational modification of eIF5A
anti-inflammatory, antimalarial drug
18256853 USA 4 NA NA
7
deoxyspergualin / gusperimus
55362
N-acil-aminoacid
388 E DHPS/eIF5A E
inhibitor of deoxyhypusine synthase (DHPS), which necessary for the synthesis of hypusine and posttranslational modification of eIF5A
NA 11964177 USA 4, EU 2 NA NA
NA DHSI-15 NA NA NA E DHPS/eIF5A E
inhibitor of deoxyhypusine synthase (DHPS), which necessary for the synthesis of hypusine and posttranslational modification of eIF5A
NA 22415796 NA ? NA
5
ciclopirox / loprox
2749
pyridone derivative
207 E DOHH/eIF5A E
inhibitor of the synthesis of hypusin which is nessary for the operation of eIF5A (iron chelator)
NA from 26$ NA
16 deferiprone 2972
pyridone derivative
139 E DOHH/eIF5A E
inhibitor of the synthesis of hypusin which is nessary for the operation of eIF5A (iron chelator)
NA from 12$ NA
14 mimosine 3862
pyridone derivative
198 E DOHH/eIF5A E
inhibitor of the synthesis of hypusin which is nessary for the operation of eIF5A (iron chelator)
NA 30208826 NA from 30$ NA
NA CC-885 24788636 ? 440.9 E eRF3 T cereblon E3 ligase modulator, targets GSPT1/2 for degradation 27338790 NA ? 5HXB
NA CC-90009 118647211 ? 461.8 E eRF3 T cereblon E3 ligase modulator, targets GSPT1/2 for degradation aka eragidomide 33197925
33764477
NA ? 6XK9
NA i14G1-10 - ? ? E eIF4G1 I Binds eIF4G1 and mimic eIF1 and eIF4G1 perturbations on the stringency of start codon selection 35857873 NA ? NA
NA i14G1-12 - ? ? E eIF4G1 I Binds eIF4G1 and mimic eIF1 and eIF4G1 perturbations on the stringency of start codon selection 35857873 NA ? NA
NA zotatifin/eFT226 129138801 rocaglate 487.5 E eIF4A I a sequence-selective inhibitor of eIF4A-mediated translation 32470302
35805935
USA 2 ? NA
NA CMLD012612 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation 31519508 NA ? NA
NA BUCMD00254 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010332 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010423 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010425 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010426 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010428 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010430 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010502 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010506 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010507 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010518 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010528 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010584 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010852 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010853 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD010855 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011166 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011167 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011352 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011353 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011702 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011833 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011840 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011842 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011849 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011850 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011865 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011866 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011871 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011876 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011877 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011878 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011879 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011888 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011889 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD011929 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD012042 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD012045 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD012046 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD012047 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD012050 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD012051 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD012070 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD012077 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA CMLD012100 - amidino-rocaglate ? E? eIF4A I inhibitor of eIF4A-mediated translation No direct evidence of protein synthesis inhibition; assumption is made upon the ability to bind eIF4A (more effectively than silvestrol for both 4A1 and 4A2) 31519508 NA ? NA
NA SR-A3 NA cyclic heptapeptide ? E? eEF1A E stabilizes eEF1A comples with Aa-tRNA on a ribosome before or after GTP hydrolysis Ternatin family 36123449 NA ? NA
NA SS-A3 NA cyclic heptapeptide ? E? eEF1A E stabilizes eEF1A comples with Aa-tRNA on a ribosome before or after GTP hydrolysis Ternatin family 36123449 NA ? NA

Table 3. Inhibitors of the main signaling pathways regulating protein biosynthesis in eukaryotic cells

SC Name Pubchem
CIDs
Class, group of chemical compounds MW Target Stage affected
(IETR)
Mechanism of action Comments References Clinical trials Cost and Vendors PDB structures
4 rapamycin / sirolimus 5284616 macrolide 914
mTORC1 (FKBP12)
I, (E)
allosteric mTOR inhibitor (mTORC1 only); 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 12742462 from 30$
1C9H, 1FAP, 1FKB, 1FKL, 1NSG, 1PBK, 1Z58, 2DG3, 2DG4, 2DG9, 2FAP, 2VCD, 3KZ7, 4DH0, 4DRH, 4DRI, 4DRJ, 4QT2, 4QT3, 5FLC, 5GPG, 5HKG, 6L3A, 6M4U, 6M4V, 6M4W
7 everolimus 6442177
macrolide, synthetic analog of rapamycin
958
mTORC1 (FKBP12)
I, (E)
allosteric mTOR inhibitor (mTORC1 only); 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 19860903 from 50$
1C9H, 1FAP, 1FKB, 1FKL, 1NSG, 1PBK, 1Z58, 2DG3, 2DG4, 2DG9, 2FAP, 2VCD, 3KZ7, 4DH0, 4DRH, 4DRI, 4DRJ, 4QT2, 4QT3, 5FLC, 5GPG, 5HKG, 6L3A, 6M4U, 6M4V, 6M4W
6 temsirolimus 6918289
macrolide, synthetic analog of rapamycin
1030
mTORC1 (FKBP12)
I, (E)
allosteric mTOR inhibitor (mTORC1 only); 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 19860903 from 75$
1C9H, 1FAP, 1FKB, 1FKL, 1NSG, 1PBK, 1Z58, 2DG3, 2DG4, 2DG9, 2FAP, 2VCD, 3KZ7, 4DH0, 4DRH, 4DRI, 4DRJ, 4QT2, 4QT3, 5FLC, 5GPG, 5HKG, 6L3A, 6M4U, 6M4V, 6M4W
5 ridaforolimus 11520894
macrolide, synthetic analog of rapamycin
990
mTORC1 (FKBP12)
I, (E)
allosteric mTOR inhibitor (mTORC1 only); 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 19860903 from 54$
1C9H, 1FAP, 1FKB, 1FKL, 1NSG, 1PBK, 1Z58, 2DG3, 2DG4, 2DG9, 2FAP, 2VCD, 3KZ7, 4DRH, 4DRI, 4DRJ, 4QT2, 4QT3, 5FLC, 5GPG, 5HKG, 6M4U, 6M4V, 6M4W
28 torin-1 49836027
pyridinonequinoline
608 _mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 19150980 NA from 50$ NA
26 torin-2 51358113
pyridinonequinoline
432 _mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 23436801 NA from 45$ 4JSX
15 PP242 / torkinib 135565635
pyrazolopyrimidine
308 _mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 20686120 NA from 41$ 4JT5
14 MLN0128 / INK128 / TAK-228 / sapanisertib 45375953 benzoxazole 309 _mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA from 39$ 6GVF, 6GVI
20 AZD2014 / vistusertib 25262792
phenylpyridine
463 _mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 23375793 from 41$ NA
19 AZD8055 25262965
phenylpyridine, vistusertib analog
466 _mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 23375793 from 40$ NA
27 NVP-BEZ235 / dactolisib 11977753
phenylquinoline
470 PI3K/mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 18606717 from 40$ NA
16 voxtalisib / SAR245409 / XL765 16123056
pyrazolylpyridine
270 PI3K/mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 24634413 USA 6, EU 3 from 50$ NA
21 LY3023414 / samotosilib 57519748
imidazoquinoline
407 PI3K/mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 27439478 from 77$ NA
18 wortmannin 312145 steroid 428 PI3K/mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 8895571 NA from 55$
1E7U, 3D5X, 3HHM
31 LY294002 3973
morpholine derivative
307 PI3K/mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 8895571 NA from 30$
1E7V, 1YI3, 4AZT, 4CFK, 6G0D
11 PQR309 / bimiralisib 58507717 pyridinamine 411 PI3K/mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 29066507 USA 8, EU 5 from 45$
5JHB, 5OQ4, 6OAC
12 gedatolisib / PKI-587 / PF05212384 44516953
benzoylpiperidine
616 PI3K/mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 20166697 from 48$ NA
25 GSK2126458 / omipalisib 25167777 quinoline 506 PI3K/mTOR I, (E)
ATP-competitive mTOR inhibitor; 4E-BP1 activation and suppression of cap-dependent translation, primarily 5'-TOP mRNA
NA 24900173 USA 3 from 56$ 3L08
30 МK1775 / adavosertib 24856436 piperazine 501 GCN2? I
GCN2 activator?, suppresses translation of 5’-TOP mRNA
NA 30224479 from 35$
5V5Y, 5VD0, 5VD4, 5VD5, 5VD7, 5VD8, 5VD9, 5VDA, 5VDK
23 dabrafenib 44462760 sulfanilide 520 GCN2? I
GCN2 activator?, suppresses translation of 5’-TOP mRNA
NA 30224479 from 50$
4XV2, 5CSW, 5HIE, 6HJ2
13 BTdCPU 49787174
N,N'-diarylurea
339 HRI I
activator of HRI - kinase of initiation factor elF2; it leads to eIF2 inactivation
NA 21765405 NA from 113$ NA
29 CCT020312 3108148 quinoline 650 PERK I
activator of PERK - kinase of initiation factor elF2; it leads to eIF2 inactivation
NA 22253692 NA from 188$ NA
10 MK-28 44265590
methylaminopentanamide
317 PERK I
activator of PERK - kinase of initiation factor elF2; it leads to eIF2 inactivation
NA 32327686 NA NA NA
32 salubrinal 5717801 480
GADD34/PP1, CReP/PP1
I
inhibitor of eIF2-specific PP1 phosphatase complexes (GADD34/P1, CReP/P1), it leads to inactivation of eIF2
NA 15705855 NA from 30$ NA
33 Sal003 5717737 462
GADD34/PP1, CReP/PP1
I
inhibitor of eIF2-specific PP1 phosphatase complexes (GADD34/P1, CReP/P1), it leads to inactivation of eIF2
NA 17418795 NA from 30$ NA
9 ISRIB 1011240
cyclohexylacetamide
451 eIF2B I
eIF2B activity modulator; prevent translation inhibition
NA NA from 25$
6CAJ, 6EZO, 6O81, 6O85
2 myriaporone 3 71306325
polyketide, tedanolide group
373 eEF2K? E
binds to eEF2K and induces phosphorylation and inactivation of eEF2
23303710 NA NA NA
3 myriaporone 4 100917959
polyketide, tedanolide group
373 eEF2K? E
binds to eEF2K and induces phosphorylation and inactivation of eEF2
23303710 NA NA NA
8 NH125 10436839
methylimidazolium iodide
525 eEF2K? E
eEF2 phosphorylation inductor
it was initially assumed to be an eEF2K inhibitor
NA from 34$ NA
17 A-484954 14998470
pyrimidine-6-carboxamide
289 eEF2K E
inhibitor of eEF2K; prevent translation inhibition
NA 22020937 NA from 41$ NA
1 65110
ribonucleotide
338 AMPK E
AMPK activator; activates AMPK without changing the levels of the nucleotides
NA 7926017 NA from 41$
1M9N, 1P4R, 1PL0, 2CNQ, 2NTL, 2QRE, 2R7K, 2R7L, 2R7N, 2R84, 2UV5, 4A1O, 4TX9, 4XW7, 4XWF, 4ZNP, 5BTP, 5DN1, 5NXA, 5PZW, 5UY8, 5UZ0, 6OD9
22 A-769662 54708532 NA 360 AMPK E
AMPK activator; activates AMPK by mimicking both effects of AMP, i.e. allosteric activation and inhibition of dephosphorylation
NA 17855357 NA from 34$ 4CFF
24 "991" 45256693
benzimidazole derivative
432 AMPK E
AMPK activator;
also enhances AMPK activity in combination with AICAR
27577855 NA from 50$ 4CFE, 5ISO

Diagram of the eukaryotic translational cycle, selected regulatory pathways, and the most commonly used and well-characterized inhibitors of protein synthesis


image/svg+xml RAS RAF MEK ERK AKT PI3K PTEN S6K1 PKR GCN2 HRI 3' 4E-BP1 4E-BP1 MNK1/2 PPM1G 80S IC 48S PIC 43SIC eIF4F Peptidebond formation Translocation GADD34 PP1 i.3 i.1 i.2 pateamine A i.2 5' cap ribavirin ? i.4 elisabatin Asilvestrolrocaglamideshippuristanolhypericin ? i.5 Аа-tRNA Binding of eIF4B P S6K1 eEF2K mTORC1 eIF4G eIF4A eIF4E eIF5B eIF1 eIF1A Met-tRNA p38 MKK 3/6 MAPKKKs eRF1 eEF1A E P A MDMP i.9 AMPK eEF2 MCTS1/DENR or eIF2D eIF3 purpuromycin id="g2542" transform="translate(1.5339388)"> e.1 eIF6 eIFsixty-4 i.8 hygromycin B ?paromomycin ?neomycin ? r.1 e.2 sordarinGM193663bouvardinRA-VIIDDD107498moriniafunginarnamial e.7 r.1 0.1 TC i.1 aurintricarboxylic acidpyrochatechol violetshowdomycingalleinNSC119889NSC119893 e.7 e.6 PIP3 ABCE1 PPi АК GDP GTP ATP AMP mTOR mTOR e.5 dabrafenibMK1775 s.3 MK-28CCT020312 s.1 wortmanninLY294002dactolisib samotosilibomipalisibvoxtalisib s.5 torin 1, 2PP242INK128Ku0063794 s.6 i.3 4EGI-14E1RCat4E2RCat edein i.6 s.7 rapamycineverolimusridaforolimustemsirolimus myriaporone 3/4NH125 s.8 AICARA-769622"991" s.9 cryptopleurinemycalamide А, Bhygromycin Bpactamycin e.6 cycloheximidelactimidomycinlissoclimidephyllanthoside emetinepederineamicoumacin A eIF2 s.4 salubrinalSal003 mTORC2 mTORC1 PIP2 e.5 lycorineamicetinbruceantinharringtoninehomoharringtonine anisomycindeoxynivalenolverrucarin AT-2 toxinnarciclasinesparsomycin blasticidin Snagilactone Cagelastatin Abactobolin AA201Apuromycin eRF3 GTP GTP GDP Pi Pi P ADP ATP BTdCPU s.2 PERK ATP eIF2B girodazoleapidaecin ? t.2 G418paromomycin e.4 TC007NB124 e.4 PF-06446846PF-0378503tetracenomycin X e.3 G418paromomycinataluren ?amlexanoxRTC14BZ16TCP-1109 t.1 ARSases ARSase Aa-tRNA ATP GDP P A E P A E P A E P A P A E P A E P A P A mefloquine ? i.7 i.7 e.2 aplidinedidemnin A, Btamandarin A, Bcytotrienin Аmycotrienin I, IInannocystin Aternatinmefloquine CReP PP1 t.1 t.2 methionine sulfamidemethionyl adenylateethionine histidinol borrelidin ochratoxin A reveromycin Afuranomycin phosmidosinefebrifuginehalofuginone tavaborole